54 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107093338	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
	LOC107095812	Zgc:77938. (388 aa)
	LOC107094203	Si:dkey-73n8.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (298 aa)
	aldh1a2	Aldehyde dehydrogenase 1 family, member A2; Belongs to the aldehyde dehydrogenase family. (505 aa)
	LOC107097168	Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (532 aa)
	rpe65	Retinoid isomerohydrolase RPE65 a. (533 aa)
	LOC107102568	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (528 aa)
	aldh1a3	Aldehyde dehydrogenase 1 family, member A3; Belongs to the aldehyde dehydrogenase family. (511 aa)
	LOC107087314	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
	LOC107089910	Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family. (521 aa)
	LOC107102649	O-acyltransferase. (501 aa)
	LOC107103711	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (527 aa)
	rdh10	Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (340 aa)
	LOC107088251	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (533 aa)
	LOC107101850	Si:ch73-334d15.1; Belongs to the UDP-glycosyltransferase family. (546 aa)
	LOC107102378	Si:ch1073-13h15.3. (613 aa)
	LOC107091536	Zgc:109982; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
	LOC107094918	LRAT domain-containing protein. (213 aa)
	ENSCVAP00000010792	Uncharacterized protein. (142 aa)
	LOC107084832	Uncharacterized protein. (611 aa)
	LOC107082507	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (540 aa)
	LOC107085180	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (346 aa)
	LOC107085203	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (529 aa)
	LOC107085204	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (528 aa)
	LOC107085179	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (529 aa)
	dhrs3	Dehydrogenase/reductase (SDR family) member 3b; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (302 aa)
	LOC107085779	PKS_ER domain-containing protein. (378 aa)
	rdh5	Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (347 aa)
	LOC107099334	Retinol dehydrogenase 8b; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
	LOC107095599	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (535 aa)
	LOC107097534	Beta-carotene oxygenase 1, like. (451 aa)
	LOC107082284	Lecithin retinol acyltransferase b, tandem duplicate 1. (233 aa)
	LOC107082299	Lecithin retinol acyltransferase b, tandem duplicate 2. (225 aa)
	sdr16c5	Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (306 aa)
	rdh12	Retinol dehydrogenase 12. (363 aa)
	LOC107095263	Si:dkey-23o4.6; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (353 aa)
	aox1	Aldehyde oxidase 6. (1332 aa)
	LOC107095807	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (376 aa)
	LOC107082002	Dehydrogenase/reductase (SDR family) member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (320 aa)
	LOC107082018	Retinol dehydrogenase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (329 aa)
	DGAT1	O-acyltransferase. (516 aa)
	LOC107093921	Beta-carotene oxygenase 1. (520 aa)
	LOC107087635	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (517 aa)
	LOC107102491	Dehydrogenase/reductase (SDR family) member 4. (278 aa)
	LOC107088265	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (529 aa)
	LOC107083039	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (316 aa)
	LOC107100583	Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (331 aa)
	LOC107085178	UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family. (493 aa)
	LOC107102879	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (300 aa)
	LOC107085778	Uncharacterized protein. (348 aa)
	LOC107085782	Uncharacterized protein. (378 aa)
	LOC107086828	UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family. (552 aa)
	LOC107104087	Retinol dehydrogenase 12, like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (303 aa)
	LOC107094667	Cytochrome P450, family 26, subfamily b, polypeptide 1; Belongs to the cytochrome P450 family. (512 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DGAT1	ENSCVAP00000010792	ENSCVAP00000021245	ENSCVAP00000010792	O-acyltransferase.	Uncharacterized protein.	0.900
DGAT1	LOC107082002	ENSCVAP00000021245	ENSCVAP00000020732	O-acyltransferase.	Dehydrogenase/reductase (SDR family) member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.713
DGAT1	LOC107082018	ENSCVAP00000021245	ENSCVAP00000020735	O-acyltransferase.	Retinol dehydrogenase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.908
DGAT1	LOC107082507	ENSCVAP00000021245	ENSCVAP00000012750	O-acyltransferase.	Cytochrome P450, family 27, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family.	0.904
DGAT1	LOC107083039	ENSCVAP00000021245	ENSCVAP00000026972	O-acyltransferase.	Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.672
DGAT1	LOC107084832	ENSCVAP00000021245	ENSCVAP00000010804	O-acyltransferase.	Uncharacterized protein.	0.900
DGAT1	LOC107085778	ENSCVAP00000021245	ENSCVAP00000029545	O-acyltransferase.	Uncharacterized protein.	0.906
DGAT1	LOC107085779	ENSCVAP00000021245	ENSCVAP00000014687	O-acyltransferase.	PKS_ER domain-containing protein.	0.906
DGAT1	LOC107085782	ENSCVAP00000021245	ENSCVAP00000029570	O-acyltransferase.	Uncharacterized protein.	0.901
DGAT1	LOC107087314	ENSCVAP00000021245	ENSCVAP00000007306	O-acyltransferase.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.713
DGAT1	LOC107087635	ENSCVAP00000021245	ENSCVAP00000024423	O-acyltransferase.	Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family.	0.913
DGAT1	LOC107091536	ENSCVAP00000021245	ENSCVAP00000010151	O-acyltransferase.	Zgc:109982; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.672
DGAT1	LOC107093338	ENSCVAP00000021245	ENSCVAP00000000135	O-acyltransferase.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.905
DGAT1	LOC107094203	ENSCVAP00000021245	ENSCVAP00000002391	O-acyltransferase.	Si:dkey-73n8.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.687
DGAT1	LOC107095263	ENSCVAP00000021245	ENSCVAP00000018556	O-acyltransferase.	Si:dkey-23o4.6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.687
DGAT1	LOC107095807	ENSCVAP00000021245	ENSCVAP00000020616	O-acyltransferase.	S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.912
DGAT1	LOC107095812	ENSCVAP00000021245	ENSCVAP00000001161	O-acyltransferase.	Zgc:77938.	0.904
DGAT1	LOC107099334	ENSCVAP00000021245	ENSCVAP00000015799	O-acyltransferase.	Retinol dehydrogenase 8b; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.672
DGAT1	LOC107100583	ENSCVAP00000021245	ENSCVAP00000027919	O-acyltransferase.	Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.687
DGAT1	LOC107102378	ENSCVAP00000021245	ENSCVAP00000010025	O-acyltransferase.	Si:ch1073-13h15.3.	0.900