67 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	atg12	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (117 aa)
	LOC107086723	Mitogen-activated protein kinase. (363 aa)
	LOC107102628	Uncharacterized protein. (676 aa)
	tank	TRAF family member-associated NFKB activator. (335 aa)
	ifih1	Interferon induced with helicase C domain 1. (971 aa)
	CHUK	Component of inhibitor of nuclear factor kappa B kinase complex. (763 aa)
	LOC107092860	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (597 aa)
	nfkbia	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b. (319 aa)
	mapk8	Mitogen-activated protein kinase. (470 aa)
	LOC107086576	Protein kinase domain-containing protein. (740 aa)
	LOC107101533	Mitogen-activated protein kinase. (429 aa)
	LOC107097205	Interferon regulatory factor 3. (463 aa)
	LOC107085483	Tripartite motif containing 25. (549 aa)
	nfkb1	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1. (893 aa)
	LOC107086707	Tripartite motif containing 25, like. (787 aa)
	LOC107101432	Mitogen-activated protein kinase. (360 aa)
	irf7	Interferon regulatory factor 7. (439 aa)
	LOC107104696	Uncharacterized protein. (676 aa)
	dhx58	DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)
	LOC107093889	Cylindromatosis (turban tumor syndrome), b. (733 aa)
	traf3	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (590 aa)
	LOC107087012	Uncharacterized protein. (550 aa)
	nlrx1	NLR family member X1. (969 aa)
	LOC107102432	Uncharacterized protein; Belongs to the DEAD box helicase family. (730 aa)
	LOC107095500	Triokinase/FMN cyclase. (489 aa)
	LOC107095483	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a. (304 aa)
	LOC107084252	Uncharacterized protein. (602 aa)
	LOC107097645	Bloodthirsty-related gene family, member 30. (622 aa)
	tbkbp1	TBK1 binding protein 1. (634 aa)
	LOC107087504	Mitogen-activated protein kinase. (357 aa)
	LOC107093789	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (580 aa)
	otud5	OTU deubiquitinase 5a. (539 aa)
	LOC107101768	Uncharacterized protein. (196 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (312 aa)
	LOC107102349	Uncharacterized protein. (503 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (572 aa)
	mapk10	Mitogen-activated protein kinase. (425 aa)
	traf2	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (515 aa)
	LOC107086324	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (341 aa)
	LOC107103405	CARD_2 domain-containing protein. (570 aa)
	LOC107088576	Mitogen-activated protein kinase. (364 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
	LOC107089666	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (337 aa)
	LOC107086824	Uncharacterized protein; Belongs to the peptidase C14A family. (477 aa)
	ENSCVAP00000017074	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (64 aa)
	LOC107101673	SCY domain-containing protein. (111 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (949 aa)
	tbk1	TANK-binding kinase 1. (720 aa)
	azi2	5-azacytidine induced 2. (400 aa)
	sike1	Suppressor of IKBKE 1. (218 aa)
	LOC107082055	Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (499 aa)
	ENSCVAP00000021995	Uncharacterized protein. (247 aa)
	Ikbke	Inhibitor of nuclear factor kappa B kinase subunit epsilon. (358 aa)
	tradd	Tnfrsf1a-associated via death domain. (292 aa)
	LOC107085477	Tripartite motif containing 25. (665 aa)
	LOC107096642	Uncharacterized protein. (552 aa)
	Pin1	Peptidyl-prolyl cis-trans isomerase. (153 aa)
	LOC107085244	Chemokine (C-X-C motif) ligand 19. (103 aa)
	LOC107091977	Uncharacterized protein. (967 aa)
	LOC107082492	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
	LOC107102529	Uncharacterized protein. (611 aa)
	ikbkb	Inhibitor of nuclear factor kappa B kinase subunit beta. (710 aa)
	sting1	Transmembrane protein 173. (395 aa)
	LOC107085709	Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. (101 aa)
	LOC107097523	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (484 aa)
	LOC107102050	Mitogen-activated protein kinase. (420 aa)
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (622 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHUK	ENSCVAP00000017074	ENSCVAP00000001539	ENSCVAP00000017074	Component of inhibitor of nuclear factor kappa B kinase complex.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.822
CHUK	LOC107086576	ENSCVAP00000001539	ENSCVAP00000002893	Component of inhibitor of nuclear factor kappa B kinase complex.	Protein kinase domain-containing protein.	0.944
CHUK	LOC107091977	ENSCVAP00000001539	ENSCVAP00000028547	Component of inhibitor of nuclear factor kappa B kinase complex.	Uncharacterized protein.	0.590
CHUK	LOC107092860	ENSCVAP00000001539	ENSCVAP00000001591	Component of inhibitor of nuclear factor kappa B kinase complex.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.579
CHUK	LOC107093789	ENSCVAP00000001539	ENSCVAP00000010683	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.987
CHUK	LOC107093889	ENSCVAP00000001539	ENSCVAP00000007972	Component of inhibitor of nuclear factor kappa B kinase complex.	Cylindromatosis (turban tumor syndrome), b.	0.590
CHUK	LOC107095483	ENSCVAP00000001539	ENSCVAP00000009748	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.	0.958
CHUK	LOC107097205	ENSCVAP00000001539	ENSCVAP00000004552	Component of inhibitor of nuclear factor kappa B kinase complex.	Interferon regulatory factor 3.	0.507
CHUK	LOC107097523	ENSCVAP00000001539	ENSCVAP00000030943	Component of inhibitor of nuclear factor kappa B kinase complex.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.962
CHUK	azi2	ENSCVAP00000001539	ENSCVAP00000019033	Component of inhibitor of nuclear factor kappa B kinase complex.	5-azacytidine induced 2.	0.604
CHUK	cyld	ENSCVAP00000001539	ENSCVAP00000017451	Component of inhibitor of nuclear factor kappa B kinase complex.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.590
CHUK	ikbkb	ENSCVAP00000001539	ENSCVAP00000030160	Component of inhibitor of nuclear factor kappa B kinase complex.	Inhibitor of nuclear factor kappa B kinase subunit beta.	0.952
CHUK	irf7	ENSCVAP00000001539	ENSCVAP00000007018	Component of inhibitor of nuclear factor kappa B kinase complex.	Interferon regulatory factor 7.	0.954
CHUK	nfkb1	ENSCVAP00000001539	ENSCVAP00000006220	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.	0.959
CHUK	nfkbia	ENSCVAP00000001539	ENSCVAP00000001881	Component of inhibitor of nuclear factor kappa B kinase complex.	Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.	0.958
CHUK	nlrx1	ENSCVAP00000001539	ENSCVAP00000008701	Component of inhibitor of nuclear factor kappa B kinase complex.	NLR family member X1.	0.546
CHUK	rela	ENSCVAP00000001539	ENSCVAP00000032924	Component of inhibitor of nuclear factor kappa B kinase complex.	V-rel avian reticuloendotheliosis viral oncogene homolog A.	0.682
CHUK	sting1	ENSCVAP00000001539	ENSCVAP00000030576	Component of inhibitor of nuclear factor kappa B kinase complex.	Transmembrane protein 173.	0.813
CHUK	tank	ENSCVAP00000001539	ENSCVAP00000001089	Component of inhibitor of nuclear factor kappa B kinase complex.	TRAF family member-associated NFKB activator.	0.521
CHUK	tbkbp1	ENSCVAP00000001539	ENSCVAP00000010561	Component of inhibitor of nuclear factor kappa B kinase complex.	TBK1 binding protein 1.	0.611