(5 nodes) Tubulin-tyrosine ligase family, and Histone acetyltransferase GCN5 network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Esi_0097_0028	Uncharacterized protein. (141 aa)
	Esi_0097_0029	Uncharacterized protein. (177 aa)
	Esi_0254_0010	DEAD box helicase. (660 aa)
	Esi_0322_0029	Bromo domain-containing protein. (719 aa)
	Esi_0053_0056	Uncharacterized protein. (1699 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0053_0056	Esi_0322_0029	D8LPR6	D8LL59	Uncharacterized protein.	Bromo domain-containing protein.	0.489
Esi_0097_0028	Esi_0322_0029	D7G9A8	D8LL59	Uncharacterized protein.	Bromo domain-containing protein.	0.489
Esi_0097_0029	Esi_0322_0029	D7G9A9	D8LL59	Uncharacterized protein.	Bromo domain-containing protein.	0.489
Esi_0254_0010	Esi_0322_0029	D8LJE9	D8LL59	DEAD box helicase.	Bromo domain-containing protein.	0.644
Esi_0322_0029	Esi_0053_0056	D8LL59	D8LPR6	Bromo domain-containing protein.	Uncharacterized protein.	0.489
Esi_0322_0029	Esi_0097_0028	D8LL59	D7G9A8	Bromo domain-containing protein.	Uncharacterized protein.	0.489
Esi_0322_0029	Esi_0097_0029	D8LL59	D7G9A9	Bromo domain-containing protein.	Uncharacterized protein.	0.489
Esi_0322_0029	Esi_0254_0010	D8LL59	D8LJE9	Bromo domain-containing protein.	DEAD box helicase.	0.644