(6 nodes) Mixed, incl. Hsp90 protein, and PPP domain network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HSP2	Heat shock protein 90. (713 aa)
	Esi_0345_0010	Uncharacterized protein. (437 aa)
	Esi_0092_0003	Uncharacterized protein. (510 aa)
	SGT1-like	SGT1 homologue. (413 aa)
	Hsp-25	Heat shock protein 90. (767 aa)
	RAR1-like	Chp-1 / RAR1 homologue. (342 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0092_0003	Esi_0345_0010	D7G8T7	D7FYI3	Uncharacterized protein.	Uncharacterized protein.	0.827
Esi_0092_0003	HSP2	D7G8T7	D7FJU9	Uncharacterized protein.	Heat shock protein 90.	0.879
Esi_0092_0003	Hsp-25	D7G8T7	D8LHY7	Uncharacterized protein.	Heat shock protein 90.	0.878
Esi_0092_0003	RAR1-like	D7G8T7	D8LIZ6	Uncharacterized protein.	Chp-1 / RAR1 homologue.	0.859
Esi_0092_0003	SGT1-like	D7G8T7	D8LF07	Uncharacterized protein.	SGT1 homologue.	0.690
Esi_0345_0010	Esi_0092_0003	D7FYI3	D7G8T7	Uncharacterized protein.	Uncharacterized protein.	0.827
Esi_0345_0010	HSP2	D7FYI3	D7FJU9	Uncharacterized protein.	Heat shock protein 90.	0.971
Esi_0345_0010	Hsp-25	D7FYI3	D8LHY7	Uncharacterized protein.	Heat shock protein 90.	0.973
Esi_0345_0010	RAR1-like	D7FYI3	D8LIZ6	Uncharacterized protein.	Chp-1 / RAR1 homologue.	0.430
Esi_0345_0010	SGT1-like	D7FYI3	D8LF07	Uncharacterized protein.	SGT1 homologue.	0.936
HSP2	Esi_0092_0003	D7FJU9	D7G8T7	Heat shock protein 90.	Uncharacterized protein.	0.879
HSP2	Esi_0345_0010	D7FJU9	D7FYI3	Heat shock protein 90.	Uncharacterized protein.	0.971
HSP2	Hsp-25	D7FJU9	D8LHY7	Heat shock protein 90.	Heat shock protein 90.	0.743
HSP2	RAR1-like	D7FJU9	D8LIZ6	Heat shock protein 90.	Chp-1 / RAR1 homologue.	0.964
HSP2	SGT1-like	D7FJU9	D8LF07	Heat shock protein 90.	SGT1 homologue.	0.999
Hsp-25	Esi_0092_0003	D8LHY7	D7G8T7	Heat shock protein 90.	Uncharacterized protein.	0.878
Hsp-25	Esi_0345_0010	D8LHY7	D7FYI3	Heat shock protein 90.	Uncharacterized protein.	0.973
Hsp-25	HSP2	D8LHY7	D7FJU9	Heat shock protein 90.	Heat shock protein 90.	0.743
Hsp-25	RAR1-like	D8LHY7	D8LIZ6	Heat shock protein 90.	Chp-1 / RAR1 homologue.	0.963
Hsp-25	SGT1-like	D8LHY7	D8LF07	Heat shock protein 90.	SGT1 homologue.	0.999