(15 nodes) Mixed, incl. Malate transport, and TraB/PryY-like network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Esi_0107_0007	Uncharacterized protein. (339 aa)
	Esi_0119_0041	Uncharacterized protein. (531 aa)
	Esi_0123_0074	Uncharacterized protein. (5722 aa)
	Esi_0179_0062	Novel protein. (1353 aa)
	Esi_0199_0008	Protein kinase domain-containing protein. (681 aa)
	PK-6	Protein kinase domain-containing protein. (1211 aa)
	Esi_0227_0021	Uncharacterized protein. (507 aa)
	Esi_0029_0083	Uncharacterized protein. (6601 aa)
	Esi_0394_0010	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (333 aa)
	Esi_0112_0034	Uncharacterized protein. (7858 aa)
	Esi_0014_0057	Uncharacterized protein. (774 aa)
	Esi_0206_0009	Oxoglutarate/malate translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family. (305 aa)
	Esi_0036_0001	Similar to Calcium-independent phospholipase A2-gamma, C terminal part. (370 aa)
	Esi_0041_0105	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (304 aa)
	Esi_0064_0081	Regulator of chromosome condensation, RCC1 Ankyrin ubiquitin interaction motif, zinc finger protein. (1310 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0014_0057	Esi_0107_0007	D8LEU2	D7FHB1	Uncharacterized protein.	Uncharacterized protein.	0.403
Esi_0014_0057	Esi_0119_0041	D8LEU2	D7FIC1	Uncharacterized protein.	Uncharacterized protein.	0.403
Esi_0014_0057	Esi_0199_0008	D8LEU2	D7FPS4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.407
Esi_0014_0057	Esi_0227_0021	D8LEU2	D7FS36	Uncharacterized protein.	Uncharacterized protein.	0.403
Esi_0014_0057	PK-6	D8LEU2	D7FR50	Uncharacterized protein.	Protein kinase domain-containing protein.	0.407
Esi_0036_0001	Esi_0199_0008	D8LL86	D7FPS4	Similar to Calcium-independent phospholipase A2-gamma, C terminal part.	Protein kinase domain-containing protein.	0.731
Esi_0036_0001	PK-6	D8LL86	D7FR50	Similar to Calcium-independent phospholipase A2-gamma, C terminal part.	Protein kinase domain-containing protein.	0.731
Esi_0041_0105	Esi_0107_0007	D8LMW0	D7FHB1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.403
Esi_0041_0105	Esi_0119_0041	D8LMW0	D7FIC1	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.403
Esi_0041_0105	Esi_0199_0008	D8LMW0	D7FPS4	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein kinase domain-containing protein.	0.407
Esi_0041_0105	Esi_0227_0021	D8LMW0	D7FS36	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.403
Esi_0041_0105	PK-6	D8LMW0	D7FR50	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Protein kinase domain-containing protein.	0.407
Esi_0107_0007	Esi_0014_0057	D7FHB1	D8LEU2	Uncharacterized protein.	Uncharacterized protein.	0.403
Esi_0107_0007	Esi_0041_0105	D7FHB1	D8LMW0	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.403
Esi_0107_0007	Esi_0199_0008	D7FHB1	D7FPS4	Uncharacterized protein.	Protein kinase domain-containing protein.	0.416
Esi_0107_0007	Esi_0206_0009	D7FHB1	D8LI74	Uncharacterized protein.	Oxoglutarate/malate translocator; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.403
Esi_0107_0007	Esi_0394_0010	D7FHB1	D7G058	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.403
Esi_0107_0007	PK-6	D7FHB1	D7FR50	Uncharacterized protein.	Protein kinase domain-containing protein.	0.416
Esi_0119_0041	Esi_0014_0057	D7FIC1	D8LEU2	Uncharacterized protein.	Uncharacterized protein.	0.403
Esi_0119_0041	Esi_0041_0105	D7FIC1	D8LMW0	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.403