(21 nodes) G alpha (12/13) signalling events, and Small GTPase network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rab2A	Rab2A, RAB family GTPase. (208 aa)
	Esi_0239_0022	Uncharacterized protein. (450 aa)
	RJL	RJL, Ras superfamily GTPase. (206 aa)
	Esi_0332_0005	Uncharacterized protein. (354 aa)
	Esi_0035_0031	THUMP domain-containing protein. (549 aa)
	Esi_0438_0010	Uncharacterized protein. (932 aa)
	RTW	RTW, Ras superfamily GTPase. (202 aa)
	Esi_0084_0065	Delta protein. (495 aa)
	Rab11D	Rab11D, RAB family GTPase. (144 aa)
	Rab11C	Rab11C, RAB family GTPase. (210 aa)
	Esi_0141_0068	Uncharacterized protein. (938 aa)
	AP2	Pathogenesis-related transcriptional factor and ERF. (443 aa)
	Esi_0192_0005	Uncharacterized protein. (516 aa)
	Rab2B	Rab2B, RAB family GTPase. (203 aa)
	RAC	RAC, RHO family GTPase. (196 aa)
	Arf2A	Arf2A, ARF family GTPase; Belongs to the small GTPase superfamily. Arf family. (186 aa)
	Esi_0321_0020	Uncharacterized protein. (954 aa)
	Esi_0422_0011	Uncharacterized protein. (1842 aa)
	Rab11A	Rab11A, RAB family GTPase. (219 aa)
	Esi_0007_0241	Uncharacterized protein. (532 aa)
	Esi_0077_0112	Uncharacterized protein. (817 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP2	Arf2A	D8LFR4	D8LKJ1	Pathogenesis-related transcriptional factor and ERF.	Arf2A, ARF family GTPase; Belongs to the small GTPase superfamily. Arf family.	0.718
AP2	Esi_0007_0241	D8LFR4	D8LRY0	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0077_0112	D8LFR4	D8LSY6	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0141_0068	D8LFR4	D8LF73	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.529
AP2	Esi_0192_0005	D8LFR4	D8LHF6	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0239_0022	D8LFR4	D7FST2	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0321_0020	D8LFR4	D8LL43	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0332_0005	D8LFR4	D7FXT6	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	Esi_0422_0011	D8LFR4	D8LN11	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.676
AP2	Esi_0438_0010	D8LFR4	D7G171	Pathogenesis-related transcriptional factor and ERF.	Uncharacterized protein.	0.466
AP2	RAC	D8LFR4	D8LIW3	Pathogenesis-related transcriptional factor and ERF.	RAC, RHO family GTPase.	0.851
AP2	RJL	D8LFR4	D7FUV0	Pathogenesis-related transcriptional factor and ERF.	RJL, Ras superfamily GTPase.	0.706
AP2	RTW	D8LFR4	D7G647	Pathogenesis-related transcriptional factor and ERF.	RTW, Ras superfamily GTPase.	0.710
AP2	Rab11A	D8LFR4	D8LQC1	Pathogenesis-related transcriptional factor and ERF.	Rab11A, RAB family GTPase.	0.710
AP2	Rab11C	D8LFR4	D8LDH8	Pathogenesis-related transcriptional factor and ERF.	Rab11C, RAB family GTPase.	0.710
AP2	Rab11D	D8LFR4	D8LCK0	Pathogenesis-related transcriptional factor and ERF.	Rab11D, RAB family GTPase.	0.710
AP2	Rab2A	D8LFR4	D7FSF1	Pathogenesis-related transcriptional factor and ERF.	Rab2A, RAB family GTPase.	0.706
AP2	Rab2B	D8LFR4	D8LIT3	Pathogenesis-related transcriptional factor and ERF.	Rab2B, RAB family GTPase.	0.706
Arf2A	AP2	D8LKJ1	D8LFR4	Arf2A, ARF family GTPase; Belongs to the small GTPase superfamily. Arf family.	Pathogenesis-related transcriptional factor and ERF.	0.718
Arf2A	Esi_0007_0241	D8LKJ1	D8LRY0	Arf2A, ARF family GTPase; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.814