(11 nodes) Set1C/COMPASS complex network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Esi_0226_0033	Uncharacterized protein. (362 aa)
	Esi_0226_0046	Uncharacterized protein. (585 aa)
	Esi_0042_0126	Retinoblastoma binding protein 5. (597 aa)
	Esi_0455_0010	SET domain-containing protein. (209 aa)
	Esi_0070_0045	Histone methyltransferase. (2067 aa)
	Esi_0069_0089	Uncharacterized protein. (3474 aa)
	Esi_0004_0064	B30.2/SPRY domain-containing protein. (326 aa)
	Esi_0115_0041	Trithorax 3. (2249 aa)
	Esi_0115_0057	Uncharacterized protein. (255 aa)
	Esi_0115_0076	GF22528. (1516 aa)
	Esi_0213_0041	Uncharacterized protein. (108 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0004_0064	Esi_0042_0126	D8LMA4	D7G0T3	B30.2/SPRY domain-containing protein.	Retinoblastoma binding protein 5.	0.999
Esi_0004_0064	Esi_0069_0089	D8LMA4	D8LRP6	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.900
Esi_0004_0064	Esi_0070_0045	D8LMA4	D8LS62	B30.2/SPRY domain-containing protein.	Histone methyltransferase.	0.900
Esi_0004_0064	Esi_0115_0041	D8LMA4	D7FHY8	B30.2/SPRY domain-containing protein.	Trithorax 3.	0.900
Esi_0004_0064	Esi_0115_0057	D8LMA4	D7FHZ8	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.923
Esi_0004_0064	Esi_0115_0076	D8LMA4	D7FI07	B30.2/SPRY domain-containing protein.	GF22528.	0.900
Esi_0004_0064	Esi_0213_0041	D8LMA4	D7FRE3	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.993
Esi_0004_0064	Esi_0226_0033	D8LMA4	D7FS13	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.949
Esi_0004_0064	Esi_0226_0046	D8LMA4	D7FS21	B30.2/SPRY domain-containing protein.	Uncharacterized protein.	0.900
Esi_0004_0064	Esi_0455_0010	D8LMA4	D7G1Q0	B30.2/SPRY domain-containing protein.	SET domain-containing protein.	0.900
Esi_0042_0126	Esi_0004_0064	D7G0T3	D8LMA4	Retinoblastoma binding protein 5.	B30.2/SPRY domain-containing protein.	0.999
Esi_0042_0126	Esi_0069_0089	D7G0T3	D8LRP6	Retinoblastoma binding protein 5.	Uncharacterized protein.	0.900
Esi_0042_0126	Esi_0070_0045	D7G0T3	D8LS62	Retinoblastoma binding protein 5.	Histone methyltransferase.	0.900
Esi_0042_0126	Esi_0115_0041	D7G0T3	D7FHY8	Retinoblastoma binding protein 5.	Trithorax 3.	0.900
Esi_0042_0126	Esi_0115_0057	D7G0T3	D7FHZ8	Retinoblastoma binding protein 5.	Uncharacterized protein.	0.881
Esi_0042_0126	Esi_0115_0076	D7G0T3	D7FI07	Retinoblastoma binding protein 5.	GF22528.	0.900
Esi_0042_0126	Esi_0213_0041	D7G0T3	D7FRE3	Retinoblastoma binding protein 5.	Uncharacterized protein.	0.993
Esi_0042_0126	Esi_0226_0033	D7G0T3	D7FS13	Retinoblastoma binding protein 5.	Uncharacterized protein.	0.921
Esi_0042_0126	Esi_0226_0046	D7G0T3	D7FS21	Retinoblastoma binding protein 5.	Uncharacterized protein.	0.900
Esi_0042_0126	Esi_0455_0010	D7G0T3	D7G1Q0	Retinoblastoma binding protein 5.	SET domain-containing protein.	0.900