(7 nodes) TCR signaling network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Esi_0009_0071	Ubiquitin-like domain-containing protein. (78 aa)
	Esi_0070_0049	Ubiquitin. (129 aa)
	Esi_0013_0071	Similar to ubiquitin and ribosomal protein S27a. (100 aa)
	Esi_0065_0007	TMEM189_B_dmain domain-containing protein. (236 aa)
	Esi_0491_0016	Uncharacterized protein. (756 aa)
	Esi_0153_0049	TMEM189_B_dmain domain-containing protein. (273 aa)
	Esi_0150_0046	Uncharacterized protein. (377 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0009_0071	Esi_0013_0071	D8LTN8	D8LE80	Ubiquitin-like domain-containing protein.	Similar to ubiquitin and ribosomal protein S27a.	0.526
Esi_0009_0071	Esi_0065_0007	D8LTN8	D7G5G4	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0009_0071	Esi_0153_0049	D8LTN8	D7FL42	Ubiquitin-like domain-containing protein.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0013_0071	Esi_0009_0071	D8LE80	D8LTN8	Similar to ubiquitin and ribosomal protein S27a.	Ubiquitin-like domain-containing protein.	0.526
Esi_0013_0071	Esi_0065_0007	D8LE80	D7G5G4	Similar to ubiquitin and ribosomal protein S27a.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0013_0071	Esi_0070_0049	D8LE80	D8LS65	Similar to ubiquitin and ribosomal protein S27a.	Ubiquitin.	0.447
Esi_0013_0071	Esi_0150_0046	D8LE80	D7FKZ7	Similar to ubiquitin and ribosomal protein S27a.	Uncharacterized protein.	0.510
Esi_0013_0071	Esi_0153_0049	D8LE80	D7FL42	Similar to ubiquitin and ribosomal protein S27a.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0065_0007	Esi_0009_0071	D7G5G4	D8LTN8	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.747
Esi_0065_0007	Esi_0013_0071	D7G5G4	D8LE80	TMEM189_B_dmain domain-containing protein.	Similar to ubiquitin and ribosomal protein S27a.	0.747
Esi_0065_0007	Esi_0070_0049	D7G5G4	D8LS65	TMEM189_B_dmain domain-containing protein.	Ubiquitin.	0.747
Esi_0065_0007	Esi_0150_0046	D7G5G4	D7FKZ7	TMEM189_B_dmain domain-containing protein.	Uncharacterized protein.	0.747
Esi_0070_0049	Esi_0013_0071	D8LS65	D8LE80	Ubiquitin.	Similar to ubiquitin and ribosomal protein S27a.	0.447
Esi_0070_0049	Esi_0065_0007	D8LS65	D7G5G4	Ubiquitin.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0070_0049	Esi_0153_0049	D8LS65	D7FL42	Ubiquitin.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0150_0046	Esi_0013_0071	D7FKZ7	D8LE80	Uncharacterized protein.	Similar to ubiquitin and ribosomal protein S27a.	0.510
Esi_0150_0046	Esi_0065_0007	D7FKZ7	D7G5G4	Uncharacterized protein.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0150_0046	Esi_0153_0049	D7FKZ7	D7FL42	Uncharacterized protein.	TMEM189_B_dmain domain-containing protein.	0.747
Esi_0153_0049	Esi_0009_0071	D7FL42	D8LTN8	TMEM189_B_dmain domain-containing protein.	Ubiquitin-like domain-containing protein.	0.747
Esi_0153_0049	Esi_0013_0071	D7FL42	D8LE80	TMEM189_B_dmain domain-containing protein.	Similar to ubiquitin and ribosomal protein S27a.	0.747