(19 nodes) Tetratricopeptide repeat network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Esi_0319_0029	TPR repeat-containing protein. (114 aa)
	Esi_1619_0001	TPR repeat-containing protein. (134 aa)
	Esi_0144_0038	Uncharacterized protein. (445 aa)
	Esi_0101_0072	TPR repeat-containing protein. (1003 aa)
	Esi_0101_0011	annotation not available (656 aa)
	Esi_0064_0062	NB-ARC and TPR repeat-containig protein. (1613 aa)
	Esi_0028_0028	Tetratricopeptide TPR_2 repeat protein. (674 aa)
	Esi_0015_0171	NB-ARC and TPR repeat-containing protein. (925 aa)
	Esi_0015_0046	TPR repeat-containing protein. (461 aa)
	Esi_0126_0047	TPR_REGION domain-containing protein. (291 aa)
	Esi_0011_0032	Tetratricopeptide TPR_2 repeat protein. (303 aa)
	Esi_0000_0373	Uncharacterized protein. (207 aa)
	Esi_0087_0044	Pc13g00620. (472 aa)
	Esi_0073_0136	Uncharacterized protein. (427 aa)
	Esi_0051_0097	TPR repeat-containing protein. (935 aa)
	Esi_0501_0005	Tetratricopeptide repeat protein. (290 aa)
	Esi_0045_0042	Kinesin light chain. (608 aa)
	Esi_0441_0007	TPR repeat-containing protein. (293 aa)
	Esi_0039_0043	NB-ARC and TPR repeat-containing protein. (1026 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0011_0032	Esi_0045_0042	D8LCK1	D7G1G8	Tetratricopeptide TPR_2 repeat protein.	Kinesin light chain.	0.442
Esi_0011_0032	Esi_0144_0038	D8LCK1	D7FKH6	Tetratricopeptide TPR_2 repeat protein.	Uncharacterized protein.	0.495
Esi_0011_0032	Esi_0319_0029	D8LCK1	D7FWZ8	Tetratricopeptide TPR_2 repeat protein.	TPR repeat-containing protein.	0.519
Esi_0011_0032	Esi_0441_0007	D8LCK1	D7G180	Tetratricopeptide TPR_2 repeat protein.	TPR repeat-containing protein.	0.527
Esi_0015_0046	Esi_0045_0042	D8LFH8	D7G1G8	TPR repeat-containing protein.	Kinesin light chain.	0.442
Esi_0015_0046	Esi_0144_0038	D8LFH8	D7FKH6	TPR repeat-containing protein.	Uncharacterized protein.	0.451
Esi_0015_0046	Esi_0319_0029	D8LFH8	D7FWZ8	TPR repeat-containing protein.	TPR repeat-containing protein.	0.508
Esi_0015_0046	Esi_0441_0007	D8LFH8	D7G180	TPR repeat-containing protein.	TPR repeat-containing protein.	0.522
Esi_0015_0046	Esi_0501_0005	D8LFH8	D7G3B0	TPR repeat-containing protein.	Tetratricopeptide repeat protein.	0.522
Esi_0015_0171	Esi_0045_0042	D8LFN6	D7G1G8	NB-ARC and TPR repeat-containing protein.	Kinesin light chain.	0.442
Esi_0028_0028	Esi_0045_0042	D8LJY3	D7G1G8	Tetratricopeptide TPR_2 repeat protein.	Kinesin light chain.	0.442
Esi_0039_0043	Esi_0045_0042	D7FZW8	D7G1G8	NB-ARC and TPR repeat-containing protein.	Kinesin light chain.	0.442
Esi_0045_0042	Esi_0011_0032	D7G1G8	D8LCK1	Kinesin light chain.	Tetratricopeptide TPR_2 repeat protein.	0.442
Esi_0045_0042	Esi_0015_0046	D7G1G8	D8LFH8	Kinesin light chain.	TPR repeat-containing protein.	0.442
Esi_0045_0042	Esi_0015_0171	D7G1G8	D8LFN6	Kinesin light chain.	NB-ARC and TPR repeat-containing protein.	0.442
Esi_0045_0042	Esi_0028_0028	D7G1G8	D8LJY3	Kinesin light chain.	Tetratricopeptide TPR_2 repeat protein.	0.442
Esi_0045_0042	Esi_0039_0043	D7G1G8	D7FZW8	Kinesin light chain.	NB-ARC and TPR repeat-containing protein.	0.442
Esi_0045_0042	Esi_0064_0062	D7G1G8	D8LRB0	Kinesin light chain.	NB-ARC and TPR repeat-containig protein.	0.442
Esi_0045_0042	Esi_0101_0072	D7G1G8	D7FGT0	Kinesin light chain.	TPR repeat-containing protein.	0.442
Esi_0045_0042	Esi_0126_0047	D7G1G8	D8LDU3	Kinesin light chain.	TPR_REGION domain-containing protein.	0.442