(21 nodes) (2018) Byssus Structure and Protein Composition in the Highly Invasive Fouling Mussel Limnoperna fortunei. network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	dnaK	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (631 aa)
	Hsp-21	Heat shock protein 70; Belongs to the heat shock protein 70 family. (688 aa)
	TUA	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
	Hsp-20	Heat shock protein 70. (729 aa)
	Hsp-19	Heat shock protein 70. (590 aa)
	Hsp-17	Heat shock protein 70. (455 aa)
	Hsp-15	Heat shock protein 70; Belongs to the heat shock protein 70 family. (719 aa)
	Hsp-14	Heat shock protein 70. (615 aa)
	Esi_0037_0094	Histone H2B; Belongs to the histone H2B family. (116 aa)
	Hsp-9	Heat shock protein 70; Belongs to the heat shock protein 70 family. (570 aa)
	TUB-3	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	TUB-2	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	TUB	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (474 aa)
	Hsp-3	Heat shock protein 70. (984 aa)
	Hsp-2	Heat shock protein 70. (707 aa)
	TUA-2	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (453 aa)
	Protein-2	EsV-1-111; Belongs to the protein kinase superfamily. (444 aa)
	Hsp-27	Heat shock protein 70. (914 aa)
	TUB-5	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (447 aa)
	TUB-4	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (448 aa)
	Hsp-22	Heat shock protein 70. (762 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Esi_0037_0094	TUA	D7FWI8	D7G923	Histone H2B; Belongs to the histone H2B family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.463
Esi_0037_0094	TUA-2	D7FWI8	D8LPR8	Histone H2B; Belongs to the histone H2B family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.463
Esi_0037_0094	TUB	D7FWI8	D7FNQ3	Histone H2B; Belongs to the histone H2B family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.596
Esi_0037_0094	TUB-2	D7FWI8	D7FNQ4	Histone H2B; Belongs to the histone H2B family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.596
Esi_0037_0094	TUB-3	D7FWI8	D7FRB0	Histone H2B; Belongs to the histone H2B family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.596
Esi_0037_0094	TUB-4	D7FWI8	D8LIS2	Histone H2B; Belongs to the histone H2B family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.596
Esi_0037_0094	TUB-5	D7FWI8	D8LIS3	Histone H2B; Belongs to the histone H2B family.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.596
Hsp-14	Hsp-15	D7G266	D7G3X0	Heat shock protein 70.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.587
Hsp-14	Hsp-17	D7G266	D7G5X8	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-14	Hsp-20	D7G266	D7G709	Heat shock protein 70.	Heat shock protein 70.	0.724
Hsp-14	Hsp-21	D7G266	D8LBY7	Heat shock protein 70.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.587
Hsp-14	Hsp-22	D7G266	D8LCN8	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-14	Hsp-3	D7G266	D7FLE9	Heat shock protein 70.	Heat shock protein 70.	0.820
Hsp-14	TUA	D7G266	D7G923	Heat shock protein 70.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.575
Hsp-14	TUA-2	D7G266	D8LPR8	Heat shock protein 70.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.575
Hsp-14	TUB	D7G266	D7FNQ3	Heat shock protein 70.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.509
Hsp-14	TUB-2	D7G266	D7FNQ4	Heat shock protein 70.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.498
Hsp-14	TUB-3	D7G266	D7FRB0	Heat shock protein 70.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.509
Hsp-14	TUB-4	D7G266	D8LIS2	Heat shock protein 70.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.509
Hsp-14	TUB-5	D7G266	D8LIS3	Heat shock protein 70.	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.509