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ccs1 ccs1 rpl34 rpl34 secA secA ycf54 ycf54 petJ petJ dnaK dnaK petN petN petM petM rpl27 rpl27 SecA SecA psaC psaC psbY psbY psaM psaM chlI chlI psaD psaD psbA_1 psbA_1 rpl21_1 rpl21_1 psbD psbD psbC psbC ilvB ilvB syfB syfB dnaB dnaB rpl36 rpl36 ccsA ccsA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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Your Input:
ccs1Cytochrome c biogenesis protein Ccs1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (429 aa)
rpl3450S ribosomal protein L34, chloroplastic. (45 aa)
secAProtein translocase subunit SecA; Has a central role in coupling the hydrolysis of ATP to the transfer of proteins across the thylakoid membrane; Belongs to the SecA family. (876 aa)
ycf54Uncharacterized protein ycf54. (172 aa)
petJCytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (110 aa)
dnaKChaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (631 aa)
petNCytochrome b6-f complex subunit 8; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (29 aa)
petMCytochrome b6-f complex subunit 7; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. (32 aa)
rpl2750S ribosomal protein L27, chloroplastic. (119 aa)
SecAProtein translocase subunit SecA; Belongs to the SecA family. (936 aa)
psaCPhotosystem I iron-sulfur center; Apoprotein for the two 4Fe-4S centers FA and FB of photosystem I (PSI); essential for photochemical activity. FB is the terminal electron acceptor of PSI, donating electrons to ferredoxin. The C-terminus interacts with PsaA/B/D and helps assemble the protein into the PSI complex. Required for binding of PsaD and PsaE to PSI. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized accepto [...] (81 aa)
psbYPhotosystem II protein Y; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family. (37 aa)
psaMPhotosystem I reaction center subunit XII. (30 aa)
chlIMg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family. (340 aa)
psaDPhotosystem I reaction center subunit II. (132 aa)
psbA_1Photosystem II protein D1; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. (360 aa)
rpl21_150S ribosomal protein L21, chloroplastic; This protein binds to 23S rRNA. (103 aa)
psbDPhotosystem II D2 protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex. (351 aa)
psbCPhotosystem II CP43 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily. (474 aa)
ilvBAcetolactate synthase. (735 aa)
syfBPhenylalanyl tRNA synthetase beta subunit. (780 aa)
dnaBReplicative DNA helicase. (584 aa)
rpl3650S ribosomal protein L36, chloroplastic. (37 aa)
ccsACytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment. (324 aa)
Your Current Organism:
Ectocarpus siliculosus
NCBI taxonomy Id: 2880
Other names: E. siliculosus
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