(13 nodes) (2023) Exposure of Mytilus galloprovincialis to Microplastics: Accumulation, Depuration and Evaluation of the Expression Levels of a Selection of Molecular Biomarkers. network (Ectocarpus siliculosus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Hsp-2	Heat shock protein 70. (707 aa)
	Hsp-3	Heat shock protein 70. (984 aa)
	Cathepsin	Cathepsin H; Belongs to the peptidase C1 family. (668 aa)
	Hsp-9	Heat shock protein 70; Belongs to the heat shock protein 70 family. (570 aa)
	Hsp-14	Heat shock protein 70. (615 aa)
	Hsp-15	Heat shock protein 70; Belongs to the heat shock protein 70 family. (719 aa)
	Hsp-17	Heat shock protein 70. (455 aa)
	Hsp-19	Heat shock protein 70. (590 aa)
	dnaK	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (631 aa)
	Hsp-20	Heat shock protein 70. (729 aa)
	Hsp-21	Heat shock protein 70; Belongs to the heat shock protein 70 family. (688 aa)
	Hsp-22	Heat shock protein 70. (762 aa)
	Hsp-27	Heat shock protein 70. (914 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Hsp-14	Hsp-15	D7G266	D7G3X0	Heat shock protein 70.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.587
Hsp-14	Hsp-17	D7G266	D7G5X8	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-14	Hsp-20	D7G266	D7G709	Heat shock protein 70.	Heat shock protein 70.	0.724
Hsp-14	Hsp-21	D7G266	D8LBY7	Heat shock protein 70.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.587
Hsp-14	Hsp-22	D7G266	D8LCN8	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-14	Hsp-3	D7G266	D7FLE9	Heat shock protein 70.	Heat shock protein 70.	0.820
Hsp-14	dnaK	D7G266	D1J774	Heat shock protein 70.	Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	0.587
Hsp-15	Hsp-14	D7G3X0	D7G266	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.587
Hsp-15	Hsp-17	D7G3X0	D7G5X8	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.622
Hsp-15	Hsp-19	D7G3X0	D7G6V4	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.587
Hsp-15	Hsp-2	D7G3X0	D7FKB7	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.587
Hsp-15	Hsp-20	D7G3X0	D7G709	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.750
Hsp-15	Hsp-22	D7G3X0	D8LCN8	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.548
Hsp-15	Hsp-27	D7G3X0	D8LNI3	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.674
Hsp-15	Hsp-3	D7G3X0	D7FLE9	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70.	0.858
Hsp-15	Hsp-9	D7G3X0	D7FSW5	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.680
Hsp-17	Hsp-14	D7G5X8	D7G266	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-17	Hsp-15	D7G5X8	D7G3X0	Heat shock protein 70.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.622
Hsp-17	Hsp-19	D7G5X8	D7G6V4	Heat shock protein 70.	Heat shock protein 70.	0.670
Hsp-17	Hsp-2	D7G5X8	D7FKB7	Heat shock protein 70.	Heat shock protein 70.	0.670