(19 nodes) Phenylalanine, tyrosine and tryptophan biosynthesis network (Ectocarpus siliculosus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DHQ-SDH	Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase. (696 aa)
	IGPS	Indole-3-glycerol-phosphate synthase. (313 aa)
	HIS8	Histidinol-phosphate transaminase. (400 aa)
	CM	Chorismate Mutase. (396 aa)
	Esi_0027_0091	Aminotran_1_2 domain-containing protein. (386 aa)
	AAT	Aspartate aminotransferase. (401 aa)
	Esi_0003_0266	Anthranilate Phosphoribosyltransferase. (372 aa)
	IGPS-2	annotation not available (387 aa)
	Esi_0086_0074	Similar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase). (434 aa)
	IGPS-3	Indole-3-glycerol-phosphate synthase. (903 aa)
	CM-PDT-PDH	Trifunctional Chorismate Mutase/Prephenate Dehydratase/Prephenate Dehydrogenase. (729 aa)
	Esi_0013_0196	3-Dehydroquinate Synthase. (444 aa)
	Esi_0137_0084	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. (515 aa)
	Esi_0281_0043	Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (C-terminal). (411 aa)
	Esi_0281_0044	Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (N-terminal). (210 aa)
	Esi_0031_0082	Chorismate Synthase. (437 aa)
	Esi_0036_0051	Tryptophan synthase (Alpha / beta chains). (741 aa)
	Esi_0060_0108	Tryptophan synthase (Alpha / beta chains). (681 aa)
	SK	Shikimate Kinase. (224 aa)

Your Current Organism:

Ectocarpus siliculosus

NCBI taxonomy Id: 2880
Other names: E. siliculosus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAT	CM	D7FVR8	D7FQ27	Aspartate aminotransferase.	Chorismate Mutase.	0.827
AAT	CM-PDT-PDH	D7FVR8	D8LBQ3	Aspartate aminotransferase.	Trifunctional Chorismate Mutase/Prephenate Dehydratase/Prephenate Dehydrogenase.	0.825
AAT	DHQ-SDH	D7FVR8	D8LTE3	Aspartate aminotransferase.	Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase.	0.687
AAT	Esi_0013_0196	D7FVR8	D8LEE6	Aspartate aminotransferase.	3-Dehydroquinate Synthase.	0.687
AAT	Esi_0027_0091	D7FVR8	D7FUE4	Aspartate aminotransferase.	Aminotran_1_2 domain-containing protein.	0.774
AAT	Esi_0031_0082	D7FVR8	D8LKW5	Aspartate aminotransferase.	Chorismate Synthase.	0.448
AAT	Esi_0036_0051	D7FVR8	D8LLB1	Aspartate aminotransferase.	Tryptophan synthase (Alpha / beta chains).	0.483
AAT	Esi_0060_0108	D7FVR8	D8LQU8	Aspartate aminotransferase.	Tryptophan synthase (Alpha / beta chains).	0.483
AAT	Esi_0086_0074	D7FVR8	D7G807	Aspartate aminotransferase.	Similar to 2-Epi-5-Epi-Valiolone Synthase (Sedoheptulose 7-Phosphate Cyclase).	0.687
AAT	Esi_0137_0084	D7FVR8	D8LER1	Aspartate aminotransferase.	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.	0.687
AAT	Esi_0281_0043	D7FVR8	D8LK76	Aspartate aminotransferase.	Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (C-terminal).	0.490
AAT	Esi_0281_0044	D7FVR8	D8LK77	Aspartate aminotransferase.	Bifunctional Indole-3-Glycerol Phosphate Synthase/Phosphoribosylanthranilate Isomerase (N-terminal).	0.490
AAT	HIS8	D7FVR8	D7FPJ8	Aspartate aminotransferase.	Histidinol-phosphate transaminase.	0.774
AAT	IGPS	D7FVR8	D7FHD7	Aspartate aminotransferase.	Indole-3-glycerol-phosphate synthase.	0.490
AAT	IGPS-2	D7FVR8	D7G2M9	Aspartate aminotransferase.	annotation not available	0.490
AAT	SK	D7FVR8	D8LTH1	Aspartate aminotransferase.	Shikimate Kinase.	0.419
CM	AAT	D7FQ27	D7FVR8	Chorismate Mutase.	Aspartate aminotransferase.	0.827
CM	CM-PDT-PDH	D7FQ27	D8LBQ3	Chorismate Mutase.	Trifunctional Chorismate Mutase/Prephenate Dehydratase/Prephenate Dehydrogenase.	0.894
CM	DHQ-SDH	D7FQ27	D8LTE3	Chorismate Mutase.	Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase.	0.793
CM	Esi_0003_0266	D7FQ27	D7FW59	Chorismate Mutase.	Anthranilate Phosphoribosyltransferase.	0.832