(11 nodes) Histidine metabolic process network (Emiliania huxleyi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0D3J8B0	Uncharacterized protein. (146 aa)
	R1C3L4_EMIHU	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family. (414 aa)
	R1D931_EMIHU	HisG_C domain-containing protein. (118 aa)
	R1D936_EMIHU	Glutamine amidotransferase type-1 domain-containing protein. (63 aa)
	R1DTC1_EMIHU	Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family. (300 aa)
	R1DWH1_EMIHU	Uncharacterized protein; Belongs to the histidinol dehydrogenase family. (314 aa)
	hisC	Histidinol phosphate aminotransferase. (437 aa)
	R1E3G4_EMIHU	Uncharacterized protein; Belongs to the HisA/HisF family. (260 aa)
	R1EJM7_EMIHU	Uncharacterized protein; Belongs to the histidinol dehydrogenase family. (363 aa)
	R1F752_EMIHU	Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family. (598 aa)
	R1FCR9_EMIHU	Histidinol phosphate aminotransferase. (397 aa)

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0D3J8B0	R1D931_EMIHU	A0A0D3J8B0	R1D931	Uncharacterized protein.	HisG_C domain-containing protein.	0.968
A0A0D3J8B0	R1D936_EMIHU	A0A0D3J8B0	R1D936	Uncharacterized protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.929
A0A0D3J8B0	R1DTC1_EMIHU	A0A0D3J8B0	R1DTC1	Uncharacterized protein.	Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.	0.994
A0A0D3J8B0	R1DWH1_EMIHU	A0A0D3J8B0	R1DWH1	Uncharacterized protein.	Uncharacterized protein; Belongs to the histidinol dehydrogenase family.	0.987
A0A0D3J8B0	R1E3G4_EMIHU	A0A0D3J8B0	R1E3G4	Uncharacterized protein.	Uncharacterized protein; Belongs to the HisA/HisF family.	0.980
A0A0D3J8B0	R1EJM7_EMIHU	A0A0D3J8B0	R1EJM7	Uncharacterized protein.	Uncharacterized protein; Belongs to the histidinol dehydrogenase family.	0.987
A0A0D3J8B0	R1F752_EMIHU	A0A0D3J8B0	R1F752	Uncharacterized protein.	Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family.	0.992
A0A0D3J8B0	R1FCR9_EMIHU	A0A0D3J8B0	R1FCR9	Uncharacterized protein.	Histidinol phosphate aminotransferase.	0.913
A0A0D3J8B0	hisC	A0A0D3J8B0	R1E293	Uncharacterized protein.	Histidinol phosphate aminotransferase.	0.991
R1C3L4_EMIHU	R1D931_EMIHU	R1C3L4	R1D931	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	HisG_C domain-containing protein.	0.968
R1C3L4_EMIHU	R1D936_EMIHU	R1C3L4	R1D936	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Glutamine amidotransferase type-1 domain-containing protein.	0.929
R1C3L4_EMIHU	R1DTC1_EMIHU	R1C3L4	R1DTC1	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.	0.997
R1C3L4_EMIHU	R1DWH1_EMIHU	R1C3L4	R1DWH1	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Uncharacterized protein; Belongs to the histidinol dehydrogenase family.	0.993
R1C3L4_EMIHU	R1E3G4_EMIHU	R1C3L4	R1E3G4	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Uncharacterized protein; Belongs to the HisA/HisF family.	0.980
R1C3L4_EMIHU	R1EJM7_EMIHU	R1C3L4	R1EJM7	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Uncharacterized protein; Belongs to the histidinol dehydrogenase family.	0.993
R1C3L4_EMIHU	R1F752_EMIHU	R1C3L4	R1F752	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Glutamine amidotransferase type-1 domain-containing protein; Belongs to the HisA/HisF family.	0.945
R1C3L4_EMIHU	R1FCR9_EMIHU	R1C3L4	R1FCR9	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Histidinol phosphate aminotransferase.	0.931
R1C3L4_EMIHU	hisC	R1C3L4	R1E293	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	Histidinol phosphate aminotransferase.	0.943
R1D931_EMIHU	A0A0D3J8B0	R1D931	A0A0D3J8B0	HisG_C domain-containing protein.	Uncharacterized protein.	0.968
R1D931_EMIHU	R1C3L4_EMIHU	R1D931	R1C3L4	HisG_C domain-containing protein.	Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.	0.968