(15 nodes) L-serine biosynthetic process, and Asparagine biosynthesis network (Emiliania huxleyi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R1BGA8_EMIHU	Uncharacterized protein. (384 aa)
	R1BRF5_EMIHU	Uncharacterized protein. (207 aa)
	R1D022_EMIHU	Uncharacterized protein. (600 aa)
	R1D1D5_EMIHU	Glutamine amidotransferase type-2 domain-containing protein. (565 aa)
	R1D8F9_EMIHU	D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (434 aa)
	R1D9C7_EMIHU	DUF108 domain-containing protein. (147 aa)
	R1DA16_EMIHU	Uncharacterized protein. (320 aa)
	R1DBG6_EMIHU	Uncharacterized protein. (299 aa)
	R1DCP0_EMIHU	Glutamine amidotransferase type-2 domain-containing protein. (535 aa)
	R1DGV6_EMIHU	Uncharacterized protein. (396 aa)
	R1E035_EMIHU	Glutamine amidotransferase type-2 domain-containing protein. (572 aa)
	R1ENI5_EMIHU	Uncharacterized protein. (349 aa)
	R1EQ73_EMIHU	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (406 aa)
	R1FKD5_EMIHU	Uncharacterized protein. (270 aa)
	R1FPL9_EMIHU	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (385 aa)

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1BGA8_EMIHU	R1D022_EMIHU	R1BGA8	R1D022	Uncharacterized protein.	Uncharacterized protein.	0.950
R1BGA8_EMIHU	R1D8F9_EMIHU	R1BGA8	R1D8F9	Uncharacterized protein.	D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.901
R1BGA8_EMIHU	R1ENI5_EMIHU	R1BGA8	R1ENI5	Uncharacterized protein.	Uncharacterized protein.	0.900
R1BGA8_EMIHU	R1EQ73_EMIHU	R1BGA8	R1EQ73	Uncharacterized protein.	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.967
R1BGA8_EMIHU	R1FPL9_EMIHU	R1BGA8	R1FPL9	Uncharacterized protein.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.900
R1BRF5_EMIHU	R1D022_EMIHU	R1BRF5	R1D022	Uncharacterized protein.	Uncharacterized protein.	0.906
R1BRF5_EMIHU	R1D8F9_EMIHU	R1BRF5	R1D8F9	Uncharacterized protein.	D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.906
R1BRF5_EMIHU	R1DA16_EMIHU	R1BRF5	R1DA16	Uncharacterized protein.	Uncharacterized protein.	0.900
R1BRF5_EMIHU	R1DBG6_EMIHU	R1BRF5	R1DBG6	Uncharacterized protein.	Uncharacterized protein.	0.900
R1BRF5_EMIHU	R1EQ73_EMIHU	R1BRF5	R1EQ73	Uncharacterized protein.	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.906
R1BRF5_EMIHU	R1FPL9_EMIHU	R1BRF5	R1FPL9	Uncharacterized protein.	D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.906
R1D022_EMIHU	R1BGA8_EMIHU	R1D022	R1BGA8	Uncharacterized protein.	Uncharacterized protein.	0.950
R1D022_EMIHU	R1BRF5_EMIHU	R1D022	R1BRF5	Uncharacterized protein.	Uncharacterized protein.	0.906
R1D022_EMIHU	R1D1D5_EMIHU	R1D022	R1D1D5	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.497
R1D022_EMIHU	R1DA16_EMIHU	R1D022	R1DA16	Uncharacterized protein.	Uncharacterized protein.	0.660
R1D022_EMIHU	R1DBG6_EMIHU	R1D022	R1DBG6	Uncharacterized protein.	Uncharacterized protein.	0.660
R1D022_EMIHU	R1DCP0_EMIHU	R1D022	R1DCP0	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.497
R1D022_EMIHU	R1DGV6_EMIHU	R1D022	R1DGV6	Uncharacterized protein.	Uncharacterized protein.	0.800
R1D022_EMIHU	R1E035_EMIHU	R1D022	R1E035	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.497
R1D022_EMIHU	R1ENI5_EMIHU	R1D022	R1ENI5	Uncharacterized protein.	Uncharacterized protein.	0.956