(19 nodes) Cytosolic small ribosomal subunit network (Emiliania huxleyi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	R1BDA5_EMIHU	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family. (145 aa)
	R1BFR6_EMIHU	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (276 aa)
	R1D8W1_EMIHU	S10_plectin domain-containing protein. (171 aa)
	R1FEL1_EMIHU	HMG box domain-containing protein. (349 aa)
	R1F2M9_EMIHU	S10_plectin domain-containing protein. (126 aa)
	R1EUC2_EMIHU	S10_plectin domain-containing protein. (166 aa)
	R1EIT6_EMIHU	S10_plectin domain-containing protein. (170 aa)
	R1EGX6_EMIHU	Uncharacterized protein. (136 aa)
	R1E604_EMIHU	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (107 aa)
	R1C8J6_EMIHU	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (248 aa)
	R1CME4_EMIHU	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (59 aa)
	R1CXH0_EMIHU	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (68 aa)
	R1D4Y3_EMIHU	Ribosomal_S10 domain-containing protein. (126 aa)
	rps10	30S ribosomal protein S10, chloroplastic; Involved in the binding of tRNA to the ribosomes. (103 aa)
	R1E369_EMIHU	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (283 aa)
	R1DZL0_EMIHU	Uncharacterized protein. (146 aa)
	R1DWT8_EMIHU	Uncharacterized protein. (128 aa)
	R1DLA2_EMIHU	Uncharacterized protein. (217 aa)
	R1BCK1_EMIHU	Uncharacterized protein. (128 aa)

Your Current Organism:

Emiliania huxleyi

NCBI taxonomy Id: 2903
Other names: E. huxleyi, Emiliania huxleyi (Lohmann) W.W.Hay & H.P.Mohler, Gephyrocapsa huxleyi, Pontosphaera huxleyi

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R1BCK1_EMIHU	R1BDA5_EMIHU	R1BCK1	R1BDA5	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
R1BCK1_EMIHU	R1BFR6_EMIHU	R1BCK1	R1BFR6	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.997
R1BCK1_EMIHU	R1C8J6_EMIHU	R1BCK1	R1C8J6	Uncharacterized protein.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.997
R1BCK1_EMIHU	R1CME4_EMIHU	R1BCK1	R1CME4	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
R1BCK1_EMIHU	R1CXH0_EMIHU	R1BCK1	R1CXH0	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
R1BCK1_EMIHU	R1D4Y3_EMIHU	R1BCK1	R1D4Y3	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.999
R1BCK1_EMIHU	R1D8W1_EMIHU	R1BCK1	R1D8W1	Uncharacterized protein.	S10_plectin domain-containing protein.	0.996
R1BCK1_EMIHU	R1DLA2_EMIHU	R1BCK1	R1DLA2	Uncharacterized protein.	Uncharacterized protein.	0.997
R1BCK1_EMIHU	R1DWT8_EMIHU	R1BCK1	R1DWT8	Uncharacterized protein.	Uncharacterized protein.	0.997
R1BCK1_EMIHU	R1DZL0_EMIHU	R1BCK1	R1DZL0	Uncharacterized protein.	Uncharacterized protein.	0.999
R1BCK1_EMIHU	R1E369_EMIHU	R1BCK1	R1E369	Uncharacterized protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.999
R1BCK1_EMIHU	R1E604_EMIHU	R1BCK1	R1E604	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
R1BCK1_EMIHU	R1EGX6_EMIHU	R1BCK1	R1EGX6	Uncharacterized protein.	Uncharacterized protein.	0.999
R1BCK1_EMIHU	R1EIT6_EMIHU	R1BCK1	R1EIT6	Uncharacterized protein.	S10_plectin domain-containing protein.	0.996
R1BCK1_EMIHU	R1EUC2_EMIHU	R1BCK1	R1EUC2	Uncharacterized protein.	S10_plectin domain-containing protein.	0.996
R1BCK1_EMIHU	R1F2M9_EMIHU	R1BCK1	R1F2M9	Uncharacterized protein.	S10_plectin domain-containing protein.	0.996
R1BCK1_EMIHU	R1FEL1_EMIHU	R1BCK1	R1FEL1	Uncharacterized protein.	HMG box domain-containing protein.	0.999
R1BCK1_EMIHU	rps10	R1BCK1	Q4G341	Uncharacterized protein.	30S ribosomal protein S10, chloroplastic; Involved in the binding of tRNA to the ribosomes.	0.999
R1BDA5_EMIHU	R1BCK1_EMIHU	R1BDA5	R1BCK1	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.999
R1BDA5_EMIHU	R1BFR6_EMIHU	R1BDA5	R1BFR6	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.996