STRINGSTRING
CKO_00170 CKO_00170 metE metE pepB pepB CKO_00296 CKO_00296 CKO_00830 CKO_00830 CKO_01141 CKO_01141 CKO_01563 CKO_01563 CKO_01629 CKO_01629 CKO_01706 CKO_01706 CKO_01707 CKO_01707 CKO_02129 CKO_02129 CKO_02559 CKO_02559 CKO_02585 CKO_02585 CKO_02713 CKO_02713 CKO_02822 CKO_02822 CKO_02940 CKO_02940 CKO_02941 CKO_02941 CKO_02959 CKO_02959 CKO_03051 CKO_03051 CKO_03055 CKO_03055 CKO_03454 CKO_03454 pepA pepA CKO_03855 CKO_03855 CKO_03902 CKO_03902 metAS metAS gshA gshA metK metK gshB gshB CKO_04402 CKO_04402 CKO_04539 CKO_04539 CKO_04868 CKO_04868 CKO_04984 CKO_04984
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CKO_00170Hypothetical protein; KEGG: shn:Shewana3_3435 1.1e-11 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. (317 aa)
metEHypothetical protein; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (753 aa)
pepBHypothetical protein; Probably plays an important role in intracellular peptide degradation. (427 aa)
CKO_00296Hypothetical protein; KEGG: pfo:Pfl_0989 6.7e-71 peptidase M17, leucyl aminopeptidase-like K01255; COG: COG0260 Leucyl aminopeptidase; Belongs to the peptidase M17 family. (440 aa)
CKO_00830Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity. (411 aa)
CKO_01141Hypothetical protein; COG: COG1956 GAF domain-containing protein; Psort location: Cytoplasmic, score:8.96. (165 aa)
CKO_01563Hypothetical protein; KEGG: lsl:LSL_0129 4.2e-78 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549; COG: COG0620 Methionine synthase II (cobalamin-independent); Psort location: Cytoplasmic, score:8.96. (367 aa)
CKO_01629Hypothetical protein; KEGG: ece:Z2627 6.4e-185 malY; enzyme that may degrade or block biosynthesis of endogenous mal inducer, probably aminotrasferase K01760; COG: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities. (390 aa)
CKO_01706Hypothetical protein; KEGG: plu:plu0524 1.4e-164 unnamed protein product; similar to cystathionine beta-synthase K01697; COG: COG0031 Cysteine synthase. (456 aa)
CKO_01707Hypothetical protein; KEGG: plu:plu0523 1.2e-149 unnamed protein product; similar to cystathionine gamma-lyase K01758; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.97. (381 aa)
CKO_02129Hypothetical protein; KEGG: stm:STM1057 0. pepN; aminopeptidase N K01256; COG: COG0308 Aminopeptidase N; Psort location: Cytoplasmic, score:9.12. (870 aa)
CKO_02559Hypothetical protein; KEGG: sec:SC0634 8.8e-188 ybdL; putative aminotransferase K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase. (389 aa)
CKO_02585Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity. (372 aa)
CKO_02713Hypothetical protein; KEGG: sec:SC0500 8.5e-174 putative cysteine synthase/cystathionine beta-synthase K01738; COG: COG0031 Cysteine synthase; Psort location: Cytoplasmic, score:8.96. (351 aa)
CKO_02822Hypothetical protein; KEGG: eco:b0261 1.3e-145 mmuM, yagD; CP4-6 prophage; S-methylmethionine:homocysteine methyltransferase K00547; COG: COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent). (310 aa)
CKO_02940Hypothetical protein; COG: NOG05997 non supervised orthologous group. (327 aa)
CKO_02941Hypothetical protein; KEGG: eca:ECA3126 2.3e-171 metE; 5-methyltetrahydropteroyltriglutamate- homocystein e methyltransferase K00549; COG: COG0620 Methionine synthase II (cobalamin-independent); Psort location: Cytoplasmic, score:8.96. (343 aa)
CKO_02959Hypothetical protein; KEGG: ece:Z0298 1.7e-225 pepD; aminoacyl-histidine dipeptidase (peptidase D) K01270; COG: COG2195 Di- and tripeptidases; Psort location: Cytoplasmic, score:8.96. (449 aa)
CKO_03051Hypothetical protein; KEGG: stt:t3511 5.6e-154 metF; 5,10 methylenetetrahydrofolate reductase K00297; COG: COG0685 5,10-methylenetetrahydrofolate reductase; Psort location: Cytoplasmic, score:8.96. (296 aa)
CKO_03055Hypothetical protein; KEGG: eco:b3939 2.8e-198 metB, met-1, met1; cystathionine gamma-synthase K01739; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.97. (386 aa)
CKO_03454Hypothetical protein; KEGG: sfl:SF3053 3.6e-159 metC; cystathionine beta-lyase K01760; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.26. (396 aa)
pepAHypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (503 aa)
CKO_03855Hypothetical protein; KEGG: eco:b4054 8.6e-197 tyrB; tyrosine aminotransferase, tyrosine repressible K00832; COG: COG1448 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:9.97. (397 aa)
CKO_03902Hypothetical protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1247 aa)
metASHypothetical protein; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family. (309 aa)
gshAHypothetical protein; KEGG: spt:SPA2677 1.2e-270 gshA; gamma-glutamylcysteine synthetase K01919; COG: COG2918 Gamma-glutamylcysteine synthetase; Psort location: Cytoplasmic, score:8.96; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily. (518 aa)
metKHypothetical protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (384 aa)
gshBHypothetical protein; KEGG: eci:UTI89_C3336 1.9e-162 gshB; glutathione synthetase K01920; COG: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Psort location: Cytoplasmic, score:8.96. (315 aa)
CKO_04402Hypothetical protein; KEGG: ecc:c3742 8.1e-201 metC; cystathionine beta-lyase K01760; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.26. (421 aa)
CKO_04539Hypothetical protein; KEGG: ecc:c1175 1.0e-184 putative aminotransferase K00842; COG: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; Psort location: Cytoplasmic, score:8.96. (390 aa)
CKO_04868Hypothetical protein; KEGG: sec:SC3480 8.2e-295 ggt; gamma-glutamyltranspeptidase K00681; COG: COG0405 Gamma-glutamyltransferase; Psort location: Periplasmic, score:10.00. (603 aa)
CKO_04984Hypothetical protein; KEGG: tde:TDE2200 6.7e-126 megL; methionine gamma-lyase K01761; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.97. (398 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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