STRINGSTRING
CKO_00524 CKO_00524 CKO_01519 CKO_01519 CKO_02016 CKO_02016 CKO_02047 CKO_02047 CKO_02048 CKO_02048 CKO_02173 CKO_02173 dps dps CKO_02705 CKO_02705 CKO_04012 CKO_04012 CKO_04019 CKO_04019 CKO_04499 CKO_04499 CKO_04500 CKO_04500 CKO_04501 CKO_04501 CKO_04502 CKO_04502 CKO_05011 CKO_05011
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CKO_00524Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96. (101 aa)
CKO_01519Hypothetical protein; KEGG: pfl:PFL_0043 2.4e-43 osmC; hydroperoxide resistance protein OsmC K04063; COG: COG1764 Predicted redox protein, regulator of disulfide bond formation. (143 aa)
CKO_02016Hypothetical protein; COG: NOG09842 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (124 aa)
CKO_02047Hypothetical protein; KEGG: mav:MAV_3849 3.8e-29 wrbA; NAD(P)H:quinone oxidoreductase, type IV K00355; COG: COG0655 Multimeric flavodoxin WrbA. (198 aa)
CKO_02048Hypothetical protein; COG: NOG13872 non supervised orthologous group. (75 aa)
CKO_02173Hypothetical protein; KEGG: reh:H16_A0619 1.9e-96 YcaC related amidohydrolase K00517; COG: COG1335 Amidases related to nicotinamidase. (208 aa)
dpsHypothetical protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. (167 aa)
CKO_02705COG: COG3126 Uncharacterized protein conserved in bacteria. (189 aa)
CKO_04012COG: COG1652 Uncharacterized protein containing LysM domain. (149 aa)
CKO_04019Hypothetical protein; COG: COG4575 Uncharacterized conserved protein. (112 aa)
CKO_04499Hypothetical protein; KEGG: mja:MJ1454 0.00013 aroD; 3-dehydroquinate dehydratase K03785; COG: NOG17164 non supervised orthologous group. (122 aa)
CKO_04500Hypothetical protein; KEGG: tma:TM1614 0.0016 ATP synthase F0, subunit b K02109; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96. (101 aa)
CKO_04501COG: COG5393 Predicted membrane protein. (132 aa)
CKO_04502Hypothetical protein; COG: NOG11454 non supervised orthologous group. (99 aa)
CKO_05011Hypothetical protein; COG: COG2944 Predicted transcriptional regulator. (96 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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