STRINGSTRING
rbsD rbsD rbsA rbsA CKO_00090 CKO_00090 CKO_00091 CKO_00091 rbsA-2 rbsA-2 CKO_03793 CKO_03793 CKO_03794 CKO_03794
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rbsDHypothetical protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (98 aa)
rbsAHypothetical protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (501 aa)
CKO_00090Hypothetical protein; KEGG: msm:MSMEG_4171 7.1e-67 ribose transport system permease protein RbsC; COG: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (321 aa)
CKO_00091Hypothetical protein; KEGG: msm:MSMEG_3095 2.5e-41 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (296 aa)
rbsA-2Hypothetical protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (506 aa)
CKO_03793Hypothetical protein; KEGG: msm:MSMEG_4171 1.6e-60 ribose transport system permease protein RbsC; COG: COG4158 Predicted ABC-type sugar transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (331 aa)
CKO_03794Hypothetical protein; KEGG: msm:MSMEG_3095 9.3e-26 D-ribose-binding periplasmic protein; COG: COG1879 ABC-type sugar transport system, periplasmic component; Psort location: Periplasmic, score:9.76. (313 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
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