STRINGSTRING
CKO_01320 CKO_01320 CKO_01321 CKO_01321 CKO_01322 CKO_01322 CKO_01323 CKO_01323 CKO_01324 CKO_01324 CKO_01378 CKO_01378 CKO_01379 CKO_01379 CKO_01380 CKO_01380 CKO_01381 CKO_01381 CKO_01382 CKO_01382 CKO_01402 CKO_01402 CKO_01486 CKO_01486 CKO_01520 CKO_01520 CKO_01521 CKO_01521 CKO_01522 CKO_01522 CKO_01523 CKO_01523 CKO_01524 CKO_01524 ddpX ddpX CKO_01526 CKO_01526 CKO_02277 CKO_02277 CKO_02278 CKO_02278 CKO_02279 CKO_02279 CKO_02280 CKO_02280 CKO_04926 CKO_04926 CKO_04927 CKO_04927 CKO_04928 CKO_04928 nikD nikD nikE nikE nikR nikR CKO_04990 CKO_04990 CKO_04991 CKO_04991 CKO_04992 CKO_04992 CKO_04993 CKO_04993 CKO_04994 CKO_04994
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CKO_01320Hypothetical protein; KEGG: shn:Shewana3_2650 2.4e-20 acetate kinase K00925; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (543 aa)
CKO_01321Hypothetical protein; KEGG: rha:RHA1_ro09047 8.1e-43 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (306 aa)
CKO_01322Hypothetical protein; KEGG: baa:BA_0884 0.00079 binding-protein-dependent transport systems inner membrane component K00294; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (302 aa)
CKO_01323Hypothetical protein; KEGG: rru:Rru_A0589 9.3e-97 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K02031; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (337 aa)
CKO_01324Hypothetical protein; KEGG: bur:Bcep18194_B0119 3.6e-95 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:9.59. (334 aa)
CKO_01378Hypothetical protein; KEGG: bur:Bcep18194_A6388 7.9e-52 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032; COG: COG4167 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: Cytoplasmic, score:9.12. (268 aa)
CKO_01379Hypothetical protein; KEGG: rru:Rru_A2359 5.6e-67 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K06020; COG: COG4170 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:8.02. (330 aa)
CKO_01380Hypothetical protein; KEGG: lwe:lwe0999 0.00049 gbuB; glycine betaine/L-proline ABC transporter, permease protein; COG: COG4171 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (296 aa)
CKO_01381Hypothetical protein; KEGG: syf:Synpcc7942_2454 2.1e-28 adenine phosphoribosyltransferase K00759; COG: COG4168 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00. (321 aa)
CKO_01382Hypothetical protein; KEGG: shn:Shewana3_2650 2.2e-120 acetate kinase K00925; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (547 aa)
CKO_01402Hypothetical protein; KEGG: shn:Shewana3_2650 1.1e-20 acetate kinase K00925; COG: COG4166 ABC-type oligopeptide transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (539 aa)
CKO_01486Hypothetical protein; KEGG: shn:Shewana3_2650 4.7e-118 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Periplasmic, score:9.76. (538 aa)
CKO_01520Hypothetical protein; KEGG: reh:H16_A1304 3.2e-64 ABC-type transporter, ATPase component: PepT family; COG: COG1124 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Psort location: Cytoplasmic, score:9.12. (314 aa)
CKO_01521Hypothetical protein; KEGG: reh:H16_B1125 2.3e-70 ABC-type transporter, ATPase component: PepT family; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (328 aa)
CKO_01522Hypothetical protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (298 aa)
CKO_01523Hypothetical protein; KEGG: rha:RHA1_ro09047 1.3e-42 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (340 aa)
CKO_01524Hypothetical protein; KEGG: shn:Shewana3_2650 1.0e-35 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Periplasmic, score:9.76. (520 aa)
ddpXHypothetical protein; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. (195 aa)
CKO_01526Hypothetical protein; KEGG: bam:Bamb_0825 0.0062 glucokinase K00845; COG: COG1737 Transcriptional regulators. (288 aa)
CKO_02277Hypothetical protein; KEGG: rha:RHA1_ro09047 4.3e-06 ABC peptide transporter, permease component K02033; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (303 aa)
CKO_02278Hypothetical protein; KEGG: rha:RHA1_ro09047 5.0e-43 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (306 aa)
CKO_02279Hypothetical protein; KEGG: shn:Shewana3_2650 1.1e-36 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: CytoplasmicMembrane, score:8.60. (512 aa)
CKO_02280Hypothetical protein; KEGG: reh:H16_A2101 2.3e-219 dppD1; ABC-type transporter, duplicated ATPase domains:PepT family; COG: COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Psort location: CytoplasmicMembrane, score:9.59. (640 aa)
CKO_04926Hypothetical protein; KEGG: shn:Shewana3_2650 1.9e-23 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Periplasmic, score:9.44. (476 aa)
CKO_04927Hypothetical protein; KEGG: rha:RHA1_ro09047 1.1e-43 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (314 aa)
CKO_04928Hypothetical protein; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (277 aa)
nikDHypothetical protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (254 aa)
nikEHypothetical protein; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Nickel importer (TC 3.A.1.5.3) family. (268 aa)
nikRHypothetical protein; Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel. (133 aa)
CKO_04990Hypothetical protein; KEGG: pen:PSEEN1053 1.2e-98 dppF; dipeptide ABC transporter, ATP-binding protein; COG: COG4608 ABC-type oligopeptide transport system, ATPase component; Psort location: Cytoplasmic, score:9.12. (334 aa)
CKO_04991Hypothetical protein; KEGG: rru:Rru_A2359 7.3e-113 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like K06020; COG: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (327 aa)
CKO_04992Hypothetical protein; KEGG: bpm:BURPS1710b_A0449 5.3e-05 glycine betaine/L-proline ABC transporter, permease protein K02001; COG: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (300 aa)
CKO_04993Hypothetical protein; KEGG: rha:RHA1_ro09047 1.5e-48 ABC peptide transporter, permease component K02033; COG: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; Psort location: CytoplasmicMembrane, score:10.00. (339 aa)
CKO_04994Hypothetical protein; KEGG: shn:Shewana3_2650 4.3e-124 acetate kinase K00925; COG: COG0747 ABC-type dipeptide transport system, periplasmic component; Psort location: Periplasmic, score:10.00. (535 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.