STRINGSTRING
napA napA CKO_00955 CKO_00955 CKO_01292 CKO_01292 CKO_01293 CKO_01293 CKO_01294 CKO_01294 CKO_01299 CKO_01299 CKO_01303 CKO_01303 CKO_01304 CKO_01304 CKO_01500 CKO_01500 CKO_01501 CKO_01501 CKO_01504 CKO_01504 nrfA nrfA CKO_04789 CKO_04789 CKO_04790 CKO_04790
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
napAHypothetical protein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. (828 aa)
CKO_00955Hypothetical protein; KEGG: shn:Shewana3_3435 3.1e-18 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. (305 aa)
CKO_01292Hypothetical protein; KEGG: azo:azo0944 4.0e-89 nasD; putative nitrate transport system, ATP-binding protein; COG: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; Psort location: Cytoplasmic, score:9.12. (262 aa)
CKO_01293Hypothetical protein; KEGG: eca:ECA2991 0. nasB; nitrite reductase [NAD(P)H] large subunit K00362; COG: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Psort location: Cytoplasmic, score:9.26; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (1355 aa)
CKO_01294Hypothetical protein; KEGG: eca:ECA2990 1.7e-264 nasA; nitrate reductase K00372; COG: COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (870 aa)
CKO_01299Hypothetical protein; COG: COG2223 Nitrate/nitrite transporter; Psort location: CytoplasmicMembrane, score:10.00. (411 aa)
CKO_01303Hypothetical protein; KEGG: spt:SPA1111 1.0e-115 narJ; respiratory nitrate reductase 1 delta chain K00373; COG: COG2180 Nitrate reductase delta subunit; Psort location: Cytoplasmic, score:8.96. (236 aa)
CKO_01304Hypothetical protein; KEGG: stm:STM1761 1.0e-115 narI; nitrate reductase gamma chain K00374; COG: COG2181 Nitrate reductase gamma subunit; Psort location: CytoplasmicMembrane, score:10.00. (225 aa)
CKO_01500Hypothetical protein; KEGG: eci:UTI89_C1683 3.1e-114 narV; respiratory nitrate reductase 2 gamma chain K08347; COG: COG2181 Nitrate reductase gamma subunit; Psort location: CytoplasmicMembrane, score:10.00. (226 aa)
CKO_01501Hypothetical protein; KEGG: sty:STY1486 8.9e-108 narW; respiratory nitrate reductase 2 delta chain K08361; COG: COG2180 Nitrate reductase delta subunit. (231 aa)
CKO_01504Hypothetical protein; COG: COG2223 Nitrate/nitrite transporter; Psort location: CytoplasmicMembrane, score:10.00. (464 aa)
nrfAHypothetical protein; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family. (478 aa)
CKO_04789Hypothetical protein; KEGG: stm:STM3474 0. nirB; nitrite reductase, large subunit K00362; COG: COG1251 NAD(P)H-nitrite reductase; Psort location: Cytoplasmic, score:9.97; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (847 aa)
CKO_04790Hypothetical protein; KEGG: sfl:SF3385 3.8e-52 nirD; nitrite reductase (NAD(P)H) subunit K00363; COG: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases; Psort location: Cytoplasmic, score:9.97. (108 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.