STRINGSTRING
CKO_02222 CKO_02222 CKO_02219 CKO_02219 CKO_02221 CKO_02221 CKO_02718 CKO_02718 CKO_02228 CKO_02228 CKO_02227 CKO_02227 CKO_02225 CKO_02225 CKO_02224 CKO_02224 CKO_02223 CKO_02223 CKO_02229 CKO_02229 CKO_02234 CKO_02234 CKO_03269 CKO_03269
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CKO_02222Hypothetical protein; COG: COG4795 Type II secretory pathway, component PulJ. (221 aa)
CKO_02219Hypothetical protein; COG: COG3149 Type II secretory pathway, component PulM. (161 aa)
CKO_02221Hypothetical protein; COG: COG3156 Type II secretory pathway, component PulK. (338 aa)
CKO_02718Hypothetical protein; KEGG: bur:Bcep18194_A5099 0.00019 RNA binding S1; COG: COG1555 DNA uptake protein and related DNA-binding proteins; Psort location: CytoplasmicMembrane, score:9.97. (124 aa)
CKO_02228Hypothetical protein; COG: COG1450 Type II secretory pathway, component PulD; Psort location: OuterMembrane, score:10.00. (640 aa)
CKO_02227Hypothetical protein; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (492 aa)
CKO_02225Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG. (149 aa)
CKO_02224Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG. (161 aa)
CKO_02223Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG. (126 aa)
CKO_02229Hypothetical protein; KEGG: rme:Rmet_2422 0.0046 peptidase S1C, Do K04771; COG: COG3031 Type II secretory pathway, component PulC; Psort location: CytoplasmicMembrane, score:9.82. (257 aa)
CKO_02234Hypothetical protein; KEGG rha:RHA1_ro04199 0.0092 DNA polymerase III subunit K00961. (166 aa)
CKO_03269Hypothetical protein; KEGG: pen:PSEEN2333 1.7e-81 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: Cytoplasmic, score:9.97. (473 aa)
Your Current Organism:
Citrobacter koseri
NCBI taxonomy Id: 290338
Other names: C. koseri ATCC BAA-895, Citrobacter (diversus) koseri ATCC BAA-895, Citrobacter koseri ATCC BAA-895, Citrobacter koseri str. ATCC BAA-895, Citrobacter koseri strain ATCC BAA-895
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.