STRINGSTRING
rhaA rhaA Jann_2592 Jann_2592 Jann_2593 Jann_2593 rhaM rhaM Jann_2599 Jann_2599
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rhaAL-rhamnose isomerase; Belongs to the rhamnose isomerase family. (411 aa)
Jann_2592Short-chain dehydrogenase/reductase SDR. (700 aa)
Jann_2593Transcriptional regulator, DeoR family. (278 aa)
rhaMProtein of unknown function DUF718; Involved in the anomeric conversion of L-rhamnose. (104 aa)
Jann_2599Carbohydrate kinase FGGY. (456 aa)
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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