STRINGSTRING
Jann_1188 Jann_1188 Jann_1189 Jann_1189 Jann_1592 Jann_1592 pcaB pcaB Jann_1663 Jann_1663 Jann_2938 Jann_2938 Jann_2958 Jann_2958 Jann_4160 Jann_4160 pobA pobA pcaC pcaC pcaH pcaH pcaG pcaG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Jann_1188Carboxymuconolactone decarboxylase. (128 aa)
Jann_1189Carboxymuconolactone decarboxylase. (141 aa)
Jann_1592Carboxymuconolactone decarboxylase. (125 aa)
pcaB3-carboxy-cis,cis-muconate cycloisomerase. (438 aa)
Jann_16633-oxoadipate enol-lactonase. (263 aa)
Jann_29383-oxoadipate enol-lactonase. (264 aa)
Jann_2958Carboxymuconolactone decarboxylase. (186 aa)
Jann_4160Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (297 aa)
pobA4-hydroxybenzoate hydroxylase. (389 aa)
pcaC4-carboxymuconolactone decarboxylase. (124 aa)
pcaHProtocatechuate 3,4-dioxygenase, beta subunit. (238 aa)
pcaGProtocatechuate 3,4-dioxygenase, alpha subunit. (181 aa)
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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