(8 nodes) Plasma membrane light-harvesting complex network (Jannaschia sp. CCS1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pufB	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (60 aa)
	pufA	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (55 aa)
	pufL	Reaction center protein L chain; Belongs to the reaction center PufL/M/PsbA/D family. (302 aa)
	pufM	Reaction center protein M chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. (332 aa)
	pufC	Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. (414 aa)
	puhA	Reaction center protein H chain. (260 aa)
	pucA	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (107 aa)
	pucB	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)

Your Current Organism:

Jannaschia sp. CCS1

NCBI taxonomy Id: 290400
Other names: J. sp. CCS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pucA	pucB	Jann_1582	Jann_1581	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pucA	pufC	Jann_1582	Jann_0171	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.	0.420
pucA	pufL	Jann_1582	Jann_0173	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein L chain; Belongs to the reaction center PufL/M/PsbA/D family.	0.420
pucB	pucA	Jann_1581	Jann_1582	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pucB	pufA	Jann_1581	Jann_0174	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.570
pucB	pufB	Jann_1581	Jann_0175	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.678
pucB	pufC	Jann_1581	Jann_0171	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.	0.510
pucB	pufL	Jann_1581	Jann_0173	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein L chain; Belongs to the reaction center PufL/M/PsbA/D family.	0.652
pucB	pufM	Jann_1581	Jann_0172	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein M chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.	0.661
pucB	puhA	Jann_1581	Jann_0155	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein H chain.	0.665
pufA	pucB	Jann_0174	Jann_1581	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.570
pufA	pufB	Jann_0174	Jann_0175	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pufA	pufC	Jann_0174	Jann_0171	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.	0.984
pufA	pufL	Jann_0174	Jann_0173	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein L chain; Belongs to the reaction center PufL/M/PsbA/D family.	0.999
pufA	pufM	Jann_0174	Jann_0172	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein M chain; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.	0.999
pufA	puhA	Jann_0174	Jann_0155	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein H chain.	0.992
pufB	pucB	Jann_0175	Jann_1581	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.678
pufB	pufA	Jann_0175	Jann_0174	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pufB	pufC	Jann_0175	Jann_0171	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor.	0.982
pufB	pufL	Jann_0175	Jann_0173	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Reaction center protein L chain; Belongs to the reaction center PufL/M/PsbA/D family.	0.999