STRINGSTRING
Jann_0229 Jann_0229 xerC xerC Jann_3231 Jann_3231 Jann_2900 Jann_2900 Jann_2865 Jann_2865 xerC-2 xerC-2 Jann_1997 Jann_1997 Jann_1546 Jann_1546 Jann_1536 Jann_1536 Jann_1167 Jann_1167 Jann_1166 Jann_1166 Jann_3521 Jann_3521 Jann_0278 Jann_0278
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Jann_0229Phage integrase; Belongs to the 'phage' integrase family. (401 aa)
xerCPhage integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (307 aa)
Jann_3231Phage integrase; Belongs to the 'phage' integrase family. (362 aa)
Jann_2900Phage integrase; Belongs to the 'phage' integrase family. (391 aa)
Jann_2865Phage integrase; Belongs to the 'phage' integrase family. (370 aa)
xerC-2Phage integrase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (304 aa)
Jann_1997Phage integrase. (422 aa)
Jann_1546Phage integrase; Belongs to the 'phage' integrase family. (387 aa)
Jann_1536Phage integrase. (201 aa)
Jann_1167Hypothetical protein. (78 aa)
Jann_1166Hypothetical protein. (76 aa)
Jann_3521Phage integrase. (422 aa)
Jann_0278Putative DNA topoisomerase I protein. (323 aa)
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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