(4 nodes) Antenna complex alpha/beta subunit network (Jannaschia sp. CCS1)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pucB	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (51 aa)
	pufA	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (55 aa)
	pufB	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (60 aa)
	pucA	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (107 aa)

Your Current Organism:

Jannaschia sp. CCS1

NCBI taxonomy Id: 290400
Other names: J. sp. CCS1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
pucA	pucB	Jann_1582	Jann_1581	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pucB	pucA	Jann_1581	Jann_1582	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Peripheral light harvesting complex subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pucB	pufA	Jann_1581	Jann_0174	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.570
pucB	pufB	Jann_1581	Jann_0175	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.678
pufA	pucB	Jann_0174	Jann_1581	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.570
pufA	pufB	Jann_0174	Jann_0175	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999
pufB	pucB	Jann_0175	Jann_1581	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.678
pufB	pufA	Jann_0175	Jann_0174	Light-harvesting protein B-800-850 beta chain B; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	Light-harvesting protein B-870 alpha chain; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.	0.999