STRINGSTRING
Jann_0669 Jann_0669 Jann_1304 Jann_1304 Jann_1323 Jann_1323 Jann_1328 Jann_1328 Jann_1403 Jann_1403 Jann_1908 Jann_1908 Jann_2532 Jann_2532 Jann_3735 Jann_3735 Jann_3956 Jann_3956
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Jann_0669benzoate-CoA ligase. (503 aa)
Jann_1304Amidase; Belongs to the amidase family. (437 aa)
Jann_1323NADH:flavin oxidoreductase/NADH oxidase. (764 aa)
Jann_1328AMP-dependent synthetase and ligase. (539 aa)
Jann_1403FMN-dependent alpha-hydroxy acid dehydrogenase. (368 aa)
Jann_1908Enoyl-CoA hydratase/isomerase. (346 aa)
Jann_2532Amidase. (463 aa)
Jann_3735Nitrilase. (341 aa)
Jann_3956Rieske (2Fe-2S) protein. (105 aa)
Your Current Organism:
Jannaschia sp. CCS1
NCBI taxonomy Id: 290400
Other names: J. sp. CCS1
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