(11 nodes) Proteasome subunit network (Ursus maritimus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSUMAP00000000287	annotation not available (248 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMB7	Proteasome subunit beta. (318 aa)
	ENSUMAP00000005891	annotation not available (157 aa)
	PSMB2	Proteasome subunit beta. (261 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMA4	Proteasome subunit alpha type. (292 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMB6	Proteasome subunit beta. (317 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)

Your Current Organism:

Ursus maritimus

NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSUMAP00000000287	ENSUMAP00000005891	ENSUMAP00000000287	ENSUMAP00000005891	annotation not available	annotation not available	0.968
ENSUMAP00000000287	PSMA3	ENSUMAP00000000287	ENSUMAP00000022999	annotation not available	Proteasome subunit alpha type.	0.997
ENSUMAP00000000287	PSMA4	ENSUMAP00000000287	ENSUMAP00000015856	annotation not available	Proteasome subunit alpha type.	0.998
ENSUMAP00000000287	PSMA5	ENSUMAP00000000287	ENSUMAP00000018247	annotation not available	Proteasome subunit alpha type.	0.998
ENSUMAP00000000287	PSMA6	ENSUMAP00000000287	ENSUMAP00000015257	annotation not available	Proteasome subunit alpha type.	0.990
ENSUMAP00000000287	PSMB2	ENSUMAP00000000287	ENSUMAP00000010036	annotation not available	Proteasome subunit beta.	0.993
ENSUMAP00000000287	PSMB4	ENSUMAP00000000287	ENSUMAP00000002823	annotation not available	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.998
ENSUMAP00000000287	PSMB5	ENSUMAP00000000287	ENSUMAP00000019193	annotation not available	Proteasome subunit beta.	0.968
ENSUMAP00000000287	PSMB6	ENSUMAP00000000287	ENSUMAP00000019741	annotation not available	Proteasome subunit beta.	0.980
ENSUMAP00000000287	PSMB7	ENSUMAP00000000287	ENSUMAP00000003640	annotation not available	Proteasome subunit beta.	0.987
ENSUMAP00000005891	ENSUMAP00000000287	ENSUMAP00000005891	ENSUMAP00000000287	annotation not available	annotation not available	0.968
ENSUMAP00000005891	PSMA3	ENSUMAP00000005891	ENSUMAP00000022999	annotation not available	Proteasome subunit alpha type.	0.996
ENSUMAP00000005891	PSMA4	ENSUMAP00000005891	ENSUMAP00000015856	annotation not available	Proteasome subunit alpha type.	0.998
ENSUMAP00000005891	PSMA5	ENSUMAP00000005891	ENSUMAP00000018247	annotation not available	Proteasome subunit alpha type.	0.999
ENSUMAP00000005891	PSMA6	ENSUMAP00000005891	ENSUMAP00000015257	annotation not available	Proteasome subunit alpha type.	0.998
ENSUMAP00000005891	PSMB2	ENSUMAP00000005891	ENSUMAP00000010036	annotation not available	Proteasome subunit beta.	0.992
ENSUMAP00000005891	PSMB4	ENSUMAP00000005891	ENSUMAP00000002823	annotation not available	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.991
ENSUMAP00000005891	PSMB5	ENSUMAP00000005891	ENSUMAP00000019193	annotation not available	Proteasome subunit beta.	0.969
ENSUMAP00000005891	PSMB6	ENSUMAP00000005891	ENSUMAP00000019741	annotation not available	Proteasome subunit beta.	0.986
ENSUMAP00000005891	PSMB7	ENSUMAP00000005891	ENSUMAP00000003640	annotation not available	Proteasome subunit beta.	0.992