(34 nodes) Mixed, incl. Organic cation/anion/zwitterion transport, and Sugar (and other) transporter network (Ursus maritimus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SLC7A3	Cationic amino acid transporter 3. (617 aa)
	SLCO3A1	Solute carrier organic anion transporter family member. (553 aa)
	SV2B	Synaptic vesicle glycoprotein 2B. (683 aa)
	SLC2A8	Solute carrier family 2, facilitated glucose transporter member 8. (304 aa)
	SLC2A11	Solute carrier family 2, facilitated glucose transporter member 11 isoform X2; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (471 aa)
	SV2A	Synaptic vesicle glycoprotein 2A. (742 aa)
	ABCG2	ATP-binding cassette sub-family G member 2 isoform X1. (649 aa)
	SLC22A14	Solute carrier family 22 member 14. (600 aa)
	ABCC1	LOW QUALITY PROTEIN: multidrug resistance-associated protein 1. (1535 aa)
	SLC47A1	Multidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (517 aa)
	SLC22A18	Solute carrier family 22 member 18. (397 aa)
	SV2C	Synaptic vesicle glycoprotein 2C isoform X2. (724 aa)
	SLC22A31	Putative solute carrier family 22 member 31. (374 aa)
	SLC44A3	Choline transporter-like protein 3 isoform X1; Belongs to the CTL (choline transporter-like) family. (623 aa)
	LOC103679572	Solute carrier family 22 member 20. (430 aa)
	SLC22A20P	Solute carrier family 22 member 20 isoform X1. (542 aa)
	LOC103672916	Cationic amino acid transporter 3-like. (625 aa)
	SLC25A18	Mitochondrial glutamate carrier 2 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family. (326 aa)
	SLC22A3	Solute carrier family 22 member 3 isoform X2. (404 aa)
	SLC22A2	LOW QUALITY PROTEIN: solute carrier family 22 member 2. (514 aa)
	SLC44A1	Choline transporter-like protein 1; Belongs to the CTL (choline transporter-like) family. (616 aa)
	SLC22A17	Solute carrier family 22 member 17. (408 aa)
	SLC22A6	Solute carrier family 22 member 6. (561 aa)
	SLC22A10	Solute carrier family 22 member 10 isoform X2. (552 aa)
	LAMB4	LOW QUALITY PROTEIN: laminin subunit beta-4. (1701 aa)
	SLC22A9	Solute carrier family 22 member 9-like. (565 aa)
	ABCB1	ATP binding cassette subfamily B member 1. (1216 aa)
	SLC22A5	Solute carrier family 22 member 5. (695 aa)
	SLC22A4	Solute carrier family 22 member 4. (501 aa)
	SLC5A7	High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (579 aa)
	ABCC2	Canalicular multispecific organic anion transporter 1. (1541 aa)
	LCN2	Neutrophil gelatinase-associated lipocalin; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
	ENSUMAP00000031686	annotation not available (224 aa)
	SLC15A2	Solute carrier family 15 member 2 isoform X1. (740 aa)

Your Current Organism:

Ursus maritimus

NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCB1	ABCC1	ENSUMAP00000023873	ENSUMAP00000008129	ATP binding cassette subfamily B member 1.	LOW QUALITY PROTEIN: multidrug resistance-associated protein 1.	0.635
ABCB1	ABCG2	ENSUMAP00000023873	ENSUMAP00000005441	ATP binding cassette subfamily B member 1.	ATP-binding cassette sub-family G member 2 isoform X1.	0.609
ABCC1	ABCB1	ENSUMAP00000008129	ENSUMAP00000023873	LOW QUALITY PROTEIN: multidrug resistance-associated protein 1.	ATP binding cassette subfamily B member 1.	0.635
ABCC1	ABCG2	ENSUMAP00000008129	ENSUMAP00000005441	LOW QUALITY PROTEIN: multidrug resistance-associated protein 1.	ATP-binding cassette sub-family G member 2 isoform X1.	0.908
ABCC2	ABCG2	ENSUMAP00000031467	ENSUMAP00000005441	Canalicular multispecific organic anion transporter 1.	ATP-binding cassette sub-family G member 2 isoform X1.	0.978
ABCC2	LOC103679572	ENSUMAP00000031467	ENSUMAP00000012998	Canalicular multispecific organic anion transporter 1.	Solute carrier family 22 member 20.	0.567
ABCC2	SLC15A2	ENSUMAP00000031467	ENSUMAP00000035092	Canalicular multispecific organic anion transporter 1.	Solute carrier family 15 member 2 isoform X1.	0.474
ABCC2	SLC22A3	ENSUMAP00000031467	ENSUMAP00000016060	Canalicular multispecific organic anion transporter 1.	Solute carrier family 22 member 3 isoform X2.	0.515
ABCC2	SLC22A6	ENSUMAP00000031467	ENSUMAP00000019945	Canalicular multispecific organic anion transporter 1.	Solute carrier family 22 member 6.	0.567
ABCG2	ABCB1	ENSUMAP00000005441	ENSUMAP00000023873	ATP-binding cassette sub-family G member 2 isoform X1.	ATP binding cassette subfamily B member 1.	0.609
ABCG2	ABCC1	ENSUMAP00000005441	ENSUMAP00000008129	ATP-binding cassette sub-family G member 2 isoform X1.	LOW QUALITY PROTEIN: multidrug resistance-associated protein 1.	0.908
ABCG2	ABCC2	ENSUMAP00000005441	ENSUMAP00000031467	ATP-binding cassette sub-family G member 2 isoform X1.	Canalicular multispecific organic anion transporter 1.	0.978
LAMB4	SV2A	ENSUMAP00000020128	ENSUMAP00000004751	LOW QUALITY PROTEIN: laminin subunit beta-4.	Synaptic vesicle glycoprotein 2A.	0.650
LAMB4	SV2B	ENSUMAP00000020128	ENSUMAP00000000424	LOW QUALITY PROTEIN: laminin subunit beta-4.	Synaptic vesicle glycoprotein 2B.	0.650
LAMB4	SV2C	ENSUMAP00000020128	ENSUMAP00000009486	LOW QUALITY PROTEIN: laminin subunit beta-4.	Synaptic vesicle glycoprotein 2C isoform X2.	0.650
LCN2	SLC22A17	ENSUMAP00000031470	ENSUMAP00000019486	Neutrophil gelatinase-associated lipocalin; Belongs to the calycin superfamily. Lipocalin family.	Solute carrier family 22 member 17.	0.908
LCN2	SLC22A31	ENSUMAP00000031470	ENSUMAP00000011209	Neutrophil gelatinase-associated lipocalin; Belongs to the calycin superfamily. Lipocalin family.	Putative solute carrier family 22 member 31.	0.908
LOC103672916	LOC103679572	ENSUMAP00000015483	ENSUMAP00000012998	Cationic amino acid transporter 3-like.	Solute carrier family 22 member 20.	0.433
LOC103672916	SLC22A6	ENSUMAP00000015483	ENSUMAP00000019945	Cationic amino acid transporter 3-like.	Solute carrier family 22 member 6.	0.433
LOC103672916	SLC25A18	ENSUMAP00000015483	ENSUMAP00000015587	Cationic amino acid transporter 3-like.	Mitochondrial glutamate carrier 2 isoform X1; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.412