STRINGSTRING
HPSE HPSE GATA1 GATA1 TMEM119 TMEM119 BMP2 BMP2 LTF LTF CCN1 CCN1 ITGAV ITGAV CTHRC1 CTHRC1 SOX8 SOX8 ABL1 ABL1 ITGB3 ITGB3 LRP5 LRP5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HPSEHeparanase. (623 aa)
GATA1LOW QUALITY PROTEIN: erythroid transcription factor. (438 aa)
TMEM119Transmembrane protein 119. (328 aa)
BMP2Bone morphogenetic protein 2 isoform X2. (395 aa)
LTFLactotransferrin; Belongs to the transferrin family. (708 aa)
CCN1Cellular communication network factor 1. (382 aa)
ITGAVLOW QUALITY PROTEIN: integrin alpha-V; Belongs to the integrin alpha chain family. (1056 aa)
CTHRC1LOW QUALITY PROTEIN: collagen triple helix repeat-containing protein 1. (113 aa)
SOX8Transcription factor SOX-8. (216 aa)
ABL1Tyrosine-protein kinase. (1135 aa)
ITGB3Integrin beta; Belongs to the integrin beta chain family. (783 aa)
LRP5Low-density lipoprotein receptor-related protein 5. (1602 aa)
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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