STRINGSTRING
CXCR5 CXCR5 TNFRSF11A TNFRSF11A RC3H2 RC3H2 FADD FADD TOX TOX CD248 CD248 ENSUMAP00000017366 ENSUMAP00000017366 LTA LTA IL15 IL15 RC3H1 RC3H1 PDPN PDPN RIPK3 RIPK3 TRAF3IP2 TRAF3IP2 POLB POLB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CXCR5LOW QUALITY PROTEIN: C-X-C chemokine receptor type 5; Belongs to the G-protein coupled receptor 1 family. (342 aa)
TNFRSF11ATumor necrosis factor receptor superfamily member 11A. (274 aa)
RC3H2Ring finger and CCCH-type domains 2. (1189 aa)
FADDFAS-associated death domain protein. (192 aa)
TOXThymocyte selection-associated high mobility group box protein TOX. (508 aa)
CD248Endosialin. (443 aa)
ENSUMAP00000017366annotation not available (86 aa)
LTALymphotoxin-alpha; Belongs to the tumor necrosis factor family. (204 aa)
IL15Interleukin; Belongs to the IL-15/IL-21 family. (161 aa)
RC3H1Ring finger and CCCH-type domains 1. (1133 aa)
PDPNPodoplanin. (190 aa)
RIPK3Receptor-interacting serine/threonine-protein kinase 3; Belongs to the protein kinase superfamily. (487 aa)
TRAF3IP2TRAF3 interacting protein 2. (563 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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