(32 nodes) Synaptic vesicle membrane network (Ursus maritimus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYP	Synaptophysin. (145 aa)
	SLC17A6	Solute carrier family 17 member 6. (582 aa)
	SV2A	Synaptic vesicle glycoprotein 2A. (742 aa)
	TMEM163	Transmembrane protein 163 isoform X1. (275 aa)
	SV2C	Synaptic vesicle glycoprotein 2C isoform X2. (724 aa)
	MCTP1	Multiple C2 and transmembrane domain-containing protein 1 isoform X2. (764 aa)
	STX10	Syntaxin-10 isoform X1; Belongs to the syntaxin family. (189 aa)
	DOC2A	LOW QUALITY PROTEIN: double C2-like domain-containing protein alpha. (383 aa)
	AMPH	Amphiphysin. (671 aa)
	PRRT1	LOW QUALITY PROTEIN: proline-rich transmembrane protein 1. (83 aa)
	RPH3A	rabphilin-3A isoform X2. (673 aa)
	RAB3A	RAB3A, member RAS oncogene family. (230 aa)
	RAB3C	RAB3C, member RAS oncogene family. (219 aa)
	SEPTIN8	Septin-8 isoform X3; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (482 aa)
	SYN2	Synapsin-2. (551 aa)
	VAMP2	Vesicle-associated membrane protein 2. (94 aa)
	SYNPR	Synaptoporin. (268 aa)
	CACFD1	Calcium channel flower homolog. (107 aa)
	BCL2	Apoptosis regulator Bcl-2. (177 aa)
	SLC17A7	Vesicular glutamate transporter 1. (555 aa)
	SLC17A8	Vesicular glutamate transporter 3 isoform X1. (569 aa)
	BCL2L1	Bcl-2-like protein 1 isoform X1. (233 aa)
	SV2B	Synaptic vesicle glycoprotein 2B. (683 aa)
	SYN3	Synapsin-3 isoform X2. (323 aa)
	ENSUMAP00000023601	annotation not available (250 aa)
	STX6	Syntaxin-6 isoform X1; Belongs to the syntaxin family. (255 aa)
	LOC103679524	Double C2-like domain-containing protein. (387 aa)
	SYNJ2	Synaptojanin-2. (985 aa)
	SEMA4C	semaphorin-4C; Belongs to the semaphorin family. (843 aa)
	STX12	Syntaxin-12; Belongs to the syntaxin family. (259 aa)
	DNM1L	Dynamin-1-like protein isoform X7; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (749 aa)
	ENSUMAP00000009342	annotation not available (134 aa)

Your Current Organism:

Ursus maritimus

NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPH	SYN2	ENSUMAP00000014886	ENSUMAP00000024504	Amphiphysin.	Synapsin-2.	0.481
AMPH	SYN3	ENSUMAP00000014886	ENSUMAP00000023614	Amphiphysin.	Synapsin-3 isoform X2.	0.481
AMPH	SYNJ2	ENSUMAP00000014886	ENSUMAP00000017501	Amphiphysin.	Synaptojanin-2.	0.755
BCL2L1	DNM1L	ENSUMAP00000000792	ENSUMAP00000003595	Bcl-2-like protein 1 isoform X1.	Dynamin-1-like protein isoform X7; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.498
DNM1L	BCL2L1	ENSUMAP00000003595	ENSUMAP00000000792	Dynamin-1-like protein isoform X7; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Bcl-2-like protein 1 isoform X1.	0.498
DNM1L	VAMP2	ENSUMAP00000003595	ENSUMAP00000023727	Dynamin-1-like protein isoform X7; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Vesicle-associated membrane protein 2.	0.460
DOC2A	RAB3A	ENSUMAP00000015052	ENSUMAP00000012764	LOW QUALITY PROTEIN: double C2-like domain-containing protein alpha.	RAB3A, member RAS oncogene family.	0.411
DOC2A	RAB3C	ENSUMAP00000015052	ENSUMAP00000012045	LOW QUALITY PROTEIN: double C2-like domain-containing protein alpha.	RAB3C, member RAS oncogene family.	0.434
ENSUMAP00000009342	ENSUMAP00000023601	ENSUMAP00000009342	ENSUMAP00000023601	annotation not available	annotation not available	0.537
ENSUMAP00000009342	RAB3A	ENSUMAP00000009342	ENSUMAP00000012764	annotation not available	RAB3A, member RAS oncogene family.	0.653
ENSUMAP00000009342	SLC17A6	ENSUMAP00000009342	ENSUMAP00000027445	annotation not available	Solute carrier family 17 member 6.	0.551
ENSUMAP00000009342	SLC17A7	ENSUMAP00000009342	ENSUMAP00000002143	annotation not available	Vesicular glutamate transporter 1.	0.629
ENSUMAP00000009342	SLC17A8	ENSUMAP00000009342	ENSUMAP00000001708	annotation not available	Vesicular glutamate transporter 3 isoform X1.	0.406
ENSUMAP00000009342	SYN2	ENSUMAP00000009342	ENSUMAP00000024504	annotation not available	Synapsin-2.	0.754
ENSUMAP00000009342	SYN3	ENSUMAP00000009342	ENSUMAP00000023614	annotation not available	Synapsin-3 isoform X2.	0.537
ENSUMAP00000009342	VAMP2	ENSUMAP00000009342	ENSUMAP00000023727	annotation not available	Vesicle-associated membrane protein 2.	0.806
ENSUMAP00000023601	ENSUMAP00000009342	ENSUMAP00000023601	ENSUMAP00000009342	annotation not available	annotation not available	0.537
ENSUMAP00000023601	RAB3A	ENSUMAP00000023601	ENSUMAP00000012764	annotation not available	RAB3A, member RAS oncogene family.	0.491
ENSUMAP00000023601	RAB3C	ENSUMAP00000023601	ENSUMAP00000012045	annotation not available	RAB3C, member RAS oncogene family.	0.493
ENSUMAP00000023601	SLC17A6	ENSUMAP00000023601	ENSUMAP00000027445	annotation not available	Solute carrier family 17 member 6.	0.453