56 items (Neomonachus schauinslandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEPT12	Septin-12; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family. (359 aa)
	RAB22A	Ras-related protein Rab-22A isoform X1. (204 aa)
	RAP1B	Ras-related protein Rap-1b. (184 aa)
	RASEF	Ras and EF-hand domain-containing protein. (737 aa)
	DYNC1LI1	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (524 aa)
	RAB17	LOW QUALITY PROTEIN: ras-related protein Rab-17. (161 aa)
	ERAS	GTPase ERas. (233 aa)
	RAB5A	Ras-related protein Rab-5A. (215 aa)
	RAB28	Ras-related protein Rab-28 isoform X1. (221 aa)
	MRAS	Ras-related protein M-Ras. (132 aa)
	TMEM19	Transmembrane protein 19 isoform X1. (336 aa)
	DIRAS3	GTP-binding protein Di-Ras3. (230 aa)
	RRAS	Ras-related protein R-Ras isoform X1. (218 aa)
	RAB5C	Ras-related protein Rab-5C. (216 aa)
	RIT1	GTP-binding protein Rit1. (219 aa)
	RAB3B	Ras-related protein Rab-3B. (219 aa)
	ARL2	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
	RAB8A	Ras-related protein Rab-8A. (207 aa)
	RAP2C	Ras-related protein Rap-2c. (183 aa)
	RAB27B	Ras-related protein Rab-27B isoform X1. (218 aa)
	RIT2	GTP-binding protein Rit2 isoform X1. (217 aa)
	RAB5B	Ras-related protein Rab-5B isoform X1. (215 aa)
	RAP2B	Ras-related protein Rap-2b. (183 aa)
	RRAS2	Ras-related protein R-Ras2. (127 aa)
	RAB2A	Ras-related protein Rab-2A. (212 aa)
	RAB29	Ras-related protein Rab-7L1 isoform X1. (203 aa)
	RAB31	Ras-related protein Rab-31. (195 aa)
	MIEF1	Mitochondrial dynamics protein MID51. (464 aa)
	RERG	Ras-related and estrogen-regulated growth inhibitor. (199 aa)
	KRAS	GTPase KRas. (188 aa)
	GEM	GTP-binding protein; Belongs to the small GTPase superfamily. RGK family. (295 aa)
	RAB9B	Ras-related protein Rab-9B. (201 aa)
	NRAS	GTPase NRas. (189 aa)
	HRAS	GTPase HRas isoform X1. (189 aa)
	RAB4A	Ras-related protein Rab-4A isoform X1. (218 aa)
	RAB14	Ras-related protein Rab-14. (215 aa)
	RAB27A	Ras-related protein Rab-27A. (221 aa)
	RASL12	Ras-like protein family member 12. (266 aa)
	RAB9A	Ras-related protein Rab-9A. (201 aa)
	LOC110584133	Ras-related protein Rab-9A-like. (201 aa)
	DIRAS2	GTP-binding protein Di-Ras2. (199 aa)
	RHEB	GTP-binding protein Rheb. (184 aa)
	RRAGD	Ras-related GTP-binding protein D. (396 aa)
	SRP54	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (504 aa)
	RAB8B	Ras-related protein Rab-8B. (207 aa)
	RAP2A	Ras-related protein Rap-2a. (183 aa)
	RAB2B	Ras-related protein Rab-2B. (216 aa)
	RALB	Ras-related protein Ral-B. (206 aa)
	RAB10	Ras-related protein Rab-10. (200 aa)
	ARL3	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	TRIM23	E3 ubiquitin-protein ligase TRIM23. (574 aa)
	RALA	Ras-related protein Ral-A. (206 aa)
	ARF6	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	RHEBL1	GTPase RhebL1. (183 aa)
	RAB35	Ras-related protein Rab-35. (221 aa)
	DIRAS1	GTP-binding protein Di-Ras1. (198 aa)

Your Current Organism:

Neomonachus schauinslandi

NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARF6	ARL2	A0A2Y9I6D0	A0A2Y9GN60	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	0.503
ARF6	RAB22A	A0A2Y9I6D0	A0A2Y9G3F7	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-22A isoform X1.	0.542
ARF6	RAB27A	A0A2Y9I6D0	A0A2Y9HCQ3	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-27A.	0.400
ARF6	RAB35	A0A2Y9I6D0	A0A2Y9IA65	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-35.	0.502
ARF6	RAB4A	A0A2Y9I6D0	A0A2Y9H8L5	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-4A isoform X1.	0.442
ARF6	TRIM23	A0A2Y9I6D0	A0A2Y9I0P2	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	E3 ubiquitin-protein ligase TRIM23.	0.770
ARL2	ARF6	A0A2Y9GN60	A0A2Y9I6D0	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.503
ARL2	ERAS	A0A2Y9GN60	A0A2Y9G6Q7	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	GTPase ERas.	0.424
ARL2	HRAS	A0A2Y9GN60	A0A2Y9H803	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	GTPase HRas isoform X1.	0.508
ARL2	KRAS	A0A2Y9GN60	A0A2Y9H3K4	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	GTPase KRas.	0.444
ARL2	NRAS	A0A2Y9GN60	A0A2Y9H767	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	GTPase NRas.	0.508
ARL2	RALA	A0A2Y9GN60	A0A2Y9I5R0	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Ral-A.	0.591
ARL2	RALB	A0A2Y9GN60	A0A2Y9HPV5	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Ral-B.	0.438
ARL2	RHEB	A0A2Y9GN60	A0A2Y9HGE1	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	GTP-binding protein Rheb.	0.537
ARL3	DYNC1LI1	A0A2Y9HV52	A0A2Y9G664	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.433
ARL3	RAB28	A0A2Y9HV52	A0A2Y9G806	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	Ras-related protein Rab-28 isoform X1.	0.436
DYNC1LI1	ARL3	A0A2Y9G664	A0A2Y9HV52	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.	0.433
DYNC1LI1	RAB4A	A0A2Y9G664	A0A2Y9H8L5	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Ras-related protein Rab-4A isoform X1.	0.453
DYNC1LI1	RAB5C	A0A2Y9G664	A0A2Y9GEC7	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	Ras-related protein Rab-5C.	0.494
ERAS	ARL2	A0A2Y9G6Q7	A0A2Y9GN60	GTPase ERas.	ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.	0.424