STRINGSTRING
DDX39A DDX39A PRPF31 PRPF31 SNU13 SNU13 PRPF4 PRPF4 GEMIN5 GEMIN5 DDX39B DDX39B SART3 SART3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
GEMIN5Gem-associated protein 5. (1508 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (435 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3. (964 aa)
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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