STRINGSTRING
FAT1 FAT1 CAMSAP3 CAMSAP3 MYO9A MYO9A LOC110583085 LOC110583085 PTK7 PTK7 SCRIB SCRIB RHOA RHOA SH3BP1 SH3BP1 LOC110577921 LOC110577921 LRRC1 LRRC1 LAMA1 LAMA1 CDC42 CDC42 FSCN1 FSCN1 OPHN1 OPHN1 FOXJ1 FOXJ1 MSN MSN PATJ PATJ TTC8 TTC8 SLC9A3R1 SLC9A3R1 RHOB RHOB SYNE4 SYNE4 FOXF1 FOXF1 PRKCI PRKCI IFT20 IFT20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAT1LOW QUALITY PROTEIN: protocadherin Fat 1. (4588 aa)
CAMSAP3Calmodulin-regulated spectrin-associated protein 3. (1088 aa)
MYO9AUnconventional myosin-IXa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2558 aa)
LOC110583085Calmodulin-regulated spectrin-associated protein 3-like. (138 aa)
PTK7Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1070 aa)
SCRIBProtein scribble homolog. (1674 aa)
RHOATransforming protein RhoA. (193 aa)
SH3BP1SH3 domain-binding protein 1 isoform X1. (690 aa)
LOC110577921Na(+)/H(+) exchange regulatory cofactor NHE-RF1-like. (106 aa)
LRRC1Leucine-rich repeat-containing protein 1 isoform X1. (524 aa)
LAMA1LOW QUALITY PROTEIN: laminin subunit alpha-1. (3077 aa)
CDC42Cell division control protein 42 homolog. (191 aa)
FSCN1Fascin. (493 aa)
OPHN1Oligophrenin-1. (749 aa)
FOXJ1Forkhead box protein J1. (421 aa)
MSNMoesin. (577 aa)
PATJinaD-like protein. (1907 aa)
TTC8Tetratricopeptide repeat protein 8 isoform X1. (541 aa)
SLC9A3R1Na(+)/H(+) exchange regulatory cofactor NHE-RF1. (280 aa)
RHOBRho-related GTP-binding protein RhoB. (196 aa)
SYNE4Nesprin-4 isoform X1. (401 aa)
FOXF1Forkhead box protein F1. (384 aa)
PRKCIProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (596 aa)
IFT20LOW QUALITY PROTEIN: intraflagellar transport protein 20 homolog. (159 aa)
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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