21 items (Neomonachus schauinslandi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NRAS	GTPase NRas. (189 aa)
	HRAS	GTPase HRas isoform X1. (189 aa)
	PRKACB	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily. (397 aa)
	PAK2	Non-specific serine/threonine protein kinase. (524 aa)
	RAF1	RAF proto-oncogene serine/threonine-protein kinase. (648 aa)
	FYN	Tyrosine-protein kinase. (537 aa)
	CREBBP	CREB-binding protein isoform X3. (2433 aa)
	PAK1	Non-specific serine/threonine protein kinase. (544 aa)
	PRKACA	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily. (351 aa)
	LOC110593796	CD209 antigen-like protein E isoform X1. (252 aa)
	RPS6KA5	Ribosomal protein S6 kinase. (798 aa)
	SRMS	Tyrosine-protein kinase. (493 aa)
	PTK6	Tyrosine-protein kinase. (486 aa)
	RELA	Transcription factor p65. (531 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit isoform X4. (987 aa)
	CCDC71L	Coiled-coil domain-containing protein 71L. (234 aa)
	RELB	Transcription factor RelB. (566 aa)
	EP300	Histone acetyltransferase p300. (2420 aa)
	LYN	Tyrosine-protein kinase. (512 aa)
	PAK3	Non-specific serine/threonine protein kinase. (544 aa)
	KRAS	GTPase KRas. (188 aa)

Your Current Organism:

Neomonachus schauinslandi

NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	EP300	A0A2Y9HQT7	A0A2Y9GZ72	CREB-binding protein isoform X3.	Histone acetyltransferase p300.	0.997
CREBBP	NFKB1	A0A2Y9HQT7	A0A2Y9GDF5	CREB-binding protein isoform X3.	Nuclear factor NF-kappa-B p105 subunit isoform X4.	0.752
CREBBP	PRKACA	A0A2Y9HQT7	A0A2Y9IBD9	CREB-binding protein isoform X3.	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.	0.958
CREBBP	PRKACB	A0A2Y9HQT7	A0A2Y9H9M4	CREB-binding protein isoform X3.	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	0.958
CREBBP	RELA	A0A2Y9HQT7	A0A2Y9GN82	CREB-binding protein isoform X3.	Transcription factor p65.	0.984
CREBBP	RELB	A0A2Y9HQT7	A0A2Y9GH55	CREB-binding protein isoform X3.	Transcription factor RelB.	0.739
EP300	CREBBP	A0A2Y9GZ72	A0A2Y9HQT7	Histone acetyltransferase p300.	CREB-binding protein isoform X3.	0.997
EP300	NFKB1	A0A2Y9GZ72	A0A2Y9GDF5	Histone acetyltransferase p300.	Nuclear factor NF-kappa-B p105 subunit isoform X4.	0.889
EP300	PRKACA	A0A2Y9GZ72	A0A2Y9IBD9	Histone acetyltransferase p300.	cAMP-dependent protein kinase catalytic subunit alpha; Belongs to the protein kinase superfamily.	0.930
EP300	PRKACB	A0A2Y9GZ72	A0A2Y9H9M4	Histone acetyltransferase p300.	cAMP-dependent protein kinase catalytic subunit beta; Belongs to the protein kinase superfamily.	0.930
EP300	RELA	A0A2Y9GZ72	A0A2Y9GN82	Histone acetyltransferase p300.	Transcription factor p65.	0.963
EP300	RELB	A0A2Y9GZ72	A0A2Y9GH55	Histone acetyltransferase p300.	Transcription factor RelB.	0.726
FYN	KRAS	A0A2Y9HIT8	A0A2Y9H3K4	Tyrosine-protein kinase.	GTPase KRas.	0.488
FYN	LYN	A0A2Y9HIT8	A0A2Y9GY53	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.861
FYN	PAK1	A0A2Y9HIT8	A0A2Y9I8W1	Tyrosine-protein kinase.	Non-specific serine/threonine protein kinase.	0.435
FYN	PAK2	A0A2Y9HIT8	A0A2Y9HFB7	Tyrosine-protein kinase.	Non-specific serine/threonine protein kinase.	0.453
FYN	RAF1	A0A2Y9HIT8	A0A2Y9HGE7	Tyrosine-protein kinase.	RAF proto-oncogene serine/threonine-protein kinase.	0.408
HRAS	KRAS	A0A2Y9H803	A0A2Y9H3K4	GTPase HRas isoform X1.	GTPase KRas.	0.809
HRAS	LYN	A0A2Y9H803	A0A2Y9GY53	GTPase HRas isoform X1.	Tyrosine-protein kinase.	0.520
HRAS	RAF1	A0A2Y9H803	A0A2Y9HGE7	GTPase HRas isoform X1.	RAF proto-oncogene serine/threonine-protein kinase.	0.918