STRINGSTRING
SCARB1 SCARB1 APOB APOB LOC110588689 LOC110588689 MYLIP MYLIP LOC110588252 LOC110588252 LIPA LIPA CUBN CUBN LOC110586377 LOC110586377 VLDLR VLDLR AP2M1 AP2M1 LIPC LIPC AP2A2 AP2A2 CLTA CLTA SOAT2 SOAT2 NPC1 NPC1 NR1H3 NR1H3 CDCP2 CDCP2 UBA52 UBA52 KXD1 KXD1 LDLRAP1 LDLRAP1 ILDR2 ILDR2 SOAT1 SOAT1 NR1H2 NR1H2 APOC1 APOC1 AP2A1 AP2A1 AP2S1 AP2S1 AMN AMN NPC2 NPC2 HDLBP HDLBP LOC110574682 LOC110574682 CES3 CES3 LDLR LDLR AP2B1 AP2B1 CLTC CLTC LSR LSR NCEH1 NCEH1 LOC110590956 LOC110590956 CLHC1 CLHC1 RPS27A RPS27A APOBR APOBR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCARB1Scavenger receptor class B member 1; Belongs to the CD36 family. (509 aa)
APOBApolipoprotein B-100. (4433 aa)
LOC110588689ubiquitin-40S ribosomal protein S27a-like. (154 aa)
MYLIPE3 ubiquitin-protein ligase MYLIP. (445 aa)
LOC110588252Ubiquitin. (77 aa)
LIPALipase; Belongs to the AB hydrolase superfamily. Lipase family. (399 aa)
CUBNCubilin. (3620 aa)
LOC110586377ubiquitin-60S ribosomal protein L40-like. (162 aa)
VLDLRVery low-density lipoprotein receptor isoform X1. (845 aa)
AP2M1AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family. (435 aa)
LIPCHepatic triacylglycerol lipase. (500 aa)
AP2A2AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (936 aa)
CLTAClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (218 aa)
SOAT2O-acyltransferase. (524 aa)
NPC1Niemann-Pick C1 protein isoform X1. (1307 aa)
NR1H3Oxysterols receptor LXR-alpha isoform X1. (447 aa)
CDCP2CUB domain-containing protein 2. (570 aa)
UBA52ubiquitin-60S ribosomal protein L40. (128 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
LDLRAP1Low density lipoprotein receptor adapter protein 1. (309 aa)
ILDR2LOW QUALITY PROTEIN: immunoglobulin-like domain-containing receptor 2. (623 aa)
SOAT1O-acyltransferase. (550 aa)
NR1H2Oxysterols receptor LXR-beta isoform X1. (454 aa)
APOC1Apolipoprotein C-I isoform X1. (162 aa)
AP2A1AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (956 aa)
AP2S1AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
AMNProtein amnionless. (465 aa)
NPC2Epididymal secretory protein E1. (149 aa)
HDLBPVigilin. (1268 aa)
LOC110574682Arylacetamide deacetylase-like 3. (406 aa)
CES3LOW QUALITY PROTEIN: carboxylesterase 3. (543 aa)
LDLRLow-density lipoprotein receptor. (861 aa)
AP2B1AP complex subunit beta. (951 aa)
CLTCClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1682 aa)
LSRLipolysis-stimulated lipoprotein receptor. (579 aa)
NCEH1Neutral cholesterol ester hydrolase 1. (408 aa)
LOC110590956ubiquitin-40S ribosomal protein S27a-like. (154 aa)
CLHC1Clathrin heavy chain linker domain-containing protein 1. (586 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
APOBRLOW QUALITY PROTEIN: apolipoprotein B receptor. (1231 aa)
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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