Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| apaH | ksgA | BPEN_129 | BPEN_130 | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.651 |
| apaH | pdxA | BPEN_129 | BPEN_131 | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.568 |
| apaH | surA | BPEN_129 | BPEN_132 | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.668 |
| apaH | ybfF | BPEN_129 | BPEN_334 | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | Putative enzyme with alpha/beta-Hydrolase domain; Ortholog to Escherichia coli bnum: b0686. | 0.933 |
| fldA | ybfF | BPEN_333 | BPEN_334 | Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | Putative enzyme with alpha/beta-Hydrolase domain; Ortholog to Escherichia coli bnum: b0686. | 0.494 |
| ksgA | apaH | BPEN_130 | BPEN_129 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | 0.651 |
| ksgA | nlpD | BPEN_130 | BPEN_173 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Lipoprotein NlpD precursor; Ortholog to Escherichia coli bnum: b2742; MultiFun: Cell structure 6.1. | 0.455 |
| ksgA | pdxA | BPEN_130 | BPEN_131 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.875 |
| ksgA | surA | BPEN_130 | BPEN_132 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.913 |
| nlpD | ksgA | BPEN_173 | BPEN_130 | Lipoprotein NlpD precursor; Ortholog to Escherichia coli bnum: b2742; MultiFun: Cell structure 6.1. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.455 |
| nlpD | surA | BPEN_173 | BPEN_132 | Lipoprotein NlpD precursor; Ortholog to Escherichia coli bnum: b2742; MultiFun: Cell structure 6.1. | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.510 |
| pdxA | apaH | BPEN_131 | BPEN_129 | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | 0.568 |
| pdxA | ksgA | BPEN_131 | BPEN_130 | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.875 |
| pdxA | surA | BPEN_131 | BPEN_132 | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.814 |
| surA | apaH | BPEN_132 | BPEN_129 | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | 0.668 |
| surA | ksgA | BPEN_132 | BPEN_130 | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.913 |
| surA | nlpD | BPEN_132 | BPEN_173 | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Lipoprotein NlpD precursor; Ortholog to Escherichia coli bnum: b2742; MultiFun: Cell structure 6.1. | 0.510 |
| surA | pdxA | BPEN_132 | BPEN_131 | Peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP). | 0.814 |
| ybfF | apaH | BPEN_334 | BPEN_129 | Putative enzyme with alpha/beta-Hydrolase domain; Ortholog to Escherichia coli bnum: b0686. | Bis(5'-nucleosyl)-tetraphosphatase; Ortholog to Escherichia coli bnum: b0049; MultiFun: Metabolism 1.7.33. | 0.933 |
| ybfF | fldA | BPEN_334 | BPEN_333 | Putative enzyme with alpha/beta-Hydrolase domain; Ortholog to Escherichia coli bnum: b0686. | Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.494 |