STRINGSTRING
PutP PutP phoQ phoQ BaeS-2 BaeS-2 cvgSY cvgSY BaeS-3 BaeS-3 styS styS tctE tctE XOO1115 XOO1115 BaeS-4 BaeS-4 colS colS hsp90xc hsp90xc cheA cheA creC creC baeS baeS pilS pilS XOO1827 XOO1827 XOO1828 XOO1828 BaeS-5 BaeS-5 regS regS BaeS-6 BaeS-6 nodV nodV htpG htpG XOO2562 XOO2562 XOO2564 XOO2564 cheA-2 cheA-2 mutL mutL BaeS-7 BaeS-7 cheA-3 cheA-3 rpfC rpfC parE parE ntrB ntrB virA virA BaeS-8 BaeS-8 XOO3528 XOO3528 colS-2 colS-2 phoR phoR torS torS colS-3 colS-3 kdpD kdpD BaeS-9 BaeS-9 BaeS-10 BaeS-10 XOO3934 XOO3934 XOO3936 XOO3936 XOO4201 XOO4201 algZ algZ gyrB gyrB ygiY ygiY BaeS BaeS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PutPNa+/proline symporter; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1217 aa)
phoQTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (471 aa)
BaeS-2Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (769 aa)
cvgSYHistidine kinase/response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (580 aa)
BaeS-3Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (678 aa)
stySHistidine kinase-response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (49 aa)
tctETwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (480 aa)
XOO1115Sensor histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (881 aa)
BaeS-4Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (460 aa)
colSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (450 aa)
hsp90xcHsp90xo protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (658 aa)
cheAChemotaxis histidine protein kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (673 aa)
creCTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (188 aa)
baeSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (397 aa)
pilSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (642 aa)
XOO1827Histidine kinase-response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1210 aa)
XOO1828Histidine kinase/response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1245 aa)
BaeS-5Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (357 aa)
regSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (433 aa)
BaeS-6Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1150 aa)
nodVNodulation protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (405 aa)
htpGHeat shock protein G; Molecular chaperone. Has ATPase activity. (612 aa)
XOO2562HrpX related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (710 aa)
XOO2564Histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (408 aa)
cheA-2Chemotaxis related protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (552 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (625 aa)
BaeS-7Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (1402 aa)
cheA-3Chemotaxis protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (669 aa)
rpfCRpfC protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (725 aa)
parETopoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (673 aa)
ntrBTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (351 aa)
virAVirA-like protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (819 aa)
BaeS-8Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (398 aa)
XOO3528Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (398 aa)
colS-2Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (442 aa)
phoRTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (447 aa)
torSTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (276 aa)
colS-3Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (443 aa)
kdpDTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (886 aa)
BaeS-9Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (499 aa)
BaeS-10Signal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (336 aa)
XOO3934Histidine kinase-response regulator hybrid protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (500 aa)
XOO3936Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (619 aa)
XOO4201Two-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (480 aa)
algZTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (350 aa)
gyrBDNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (874 aa)
ygiYTwo-component system sensor protein; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (105 aa)
BaeSSignal transduction histidine kinase; Identified by sequence similarity; putative; ORF located using Blastx/Glimmer/Genemark. (458 aa)
Your Current Organism:
Xanthomonas oryzae
NCBI taxonomy Id: 291331
Other names: X. oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae KACC 10331, Xanthomonas oryzae pv. oryzae str. KACC 10331, Xanthomonas oryzae pv. oryzae strain KACC 10331
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