STRINGSTRING
ENSVURP00010000376 ENSVURP00010000376 SRRM2 SRRM2 LOC114043154 LOC114043154 ENSVURP00010000843 ENSVURP00010000843 XAB2 XAB2 LOC114043166 LOC114043166 ENSVURP00010001224 ENSVURP00010001224 SF3B3 SF3B3 SF3B2 SF3B2 ENSVURP00010001407 ENSVURP00010001407 SART1 SART1 ENSVURP00010001689 ENSVURP00010001689 DHX16 DHX16 ENSVURP00010001966 ENSVURP00010001966 PHF5A PHF5A PPRC1 PPRC1 ENSVURP00010002355 ENSVURP00010002355 PPIL4 PPIL4 ENSVURP00010002552 ENSVURP00010002552 PPIE PPIE WDR70 WDR70 LOC114034912 LOC114034912 ENSVURP00010003042 ENSVURP00010003042 SF3A3 SF3A3 ENSVURP00010003339 ENSVURP00010003339 SNIP1 SNIP1 ENSVURP00010003732 ENSVURP00010003732 LSM10 LSM10 PRKRIP1 PRKRIP1 WDR25 WDR25 U2AF2 U2AF2 SF1 SF1 ENSVURP00010004375 ENSVURP00010004375 PRPF19 PRPF19 SLU7 SLU7 LOC114031006 LOC114031006 ENSVURP00010005887 ENSVURP00010005887 CDC5L CDC5L ENSVURP00010006207 ENSVURP00010006207 LOC114043304 LOC114043304 SYF2 SYF2 ENSVURP00010006603 ENSVURP00010006603 ENSVURP00010006612 ENSVURP00010006612 MFAP1 MFAP1 CRNKL1 CRNKL1 ENSVURP00010007910 ENSVURP00010007910 DDX23 DDX23 ENSVURP00010008356 ENSVURP00010008356 CWC25 CWC25 PRPF40B PRPF40B SART3 SART3 SNRPB2 SNRPB2 ENSVURP00010009339 ENSVURP00010009339 DAW1 DAW1 DDX46 DDX46 SF3B6 SF3B6 WDR53 WDR53 RBM22 RBM22 PRPF8 PRPF8 TCERG1 TCERG1 EFTUD2 EFTUD2 ENSVURP00010011350 ENSVURP00010011350 AQR AQR PPIL3 PPIL3 LOC114050192 LOC114050192 USP39 USP39 SNRPA1 SNRPA1 ENSVURP00010012456 ENSVURP00010012456 TFIP11 TFIP11 BCAS2 BCAS2 SNRPD1 SNRPD1 LOC114031880 LOC114031880 PQBP1 PQBP1 ZMAT5 ZMAT5 CWC15 CWC15 FAM32A FAM32A SF3A1 SF3A1 CDC40 CDC40 CCDC12 CCDC12 LOC114029994 LOC114029994 PRPF31 PRPF31 LOC114040343 LOC114040343 ENSVURP00010015345 ENSVURP00010015345 SNRNP27 SNRNP27 SNRPG SNRPG SMU1 SMU1 PLRG1 PLRG1 DHX40 DHX40 SNRNP70 SNRNP70 SNRPE SNRPE CTNNBL1 CTNNBL1 LOC114046273 LOC114046273 LOC114045545 LOC114045545 DHX35 DHX35 PRPF6 PRPF6 PRPF18 PRPF18 CWF19L2 CWF19L2 LRMDA LRMDA RBM41 RBM41 ENSVURP00010018544 ENSVURP00010018544 RNF113A RNF113A LSM4 LSM4 ENSVURP00010019848 ENSVURP00010019848 ENSVURP00010019986 ENSVURP00010019986 SNRNP200 SNRNP200 ENSVURP00010020338 ENSVURP00010020338 ENSVURP00010020394 ENSVURP00010020394 SF3A2 SF3A2 ENSVURP00010020594 ENSVURP00010020594 ENSVURP00010020760 ENSVURP00010020760 ENSVURP00010021166 ENSVURP00010021166 PRPF4 PRPF4 ENSVURP00010021538 ENSVURP00010021538 ZMAT2 ZMAT2 SNRPC SNRPC SNRPB SNRPB ISY1 ISY1 SF3B1 SF3B1 IK IK WBP11 WBP11 ENSVURP00010023372 ENSVURP00010023372 ZC2HC1C ZC2HC1C BUD31 BUD31 SNRPD2 SNRPD2 PRPF38A PRPF38A ENSVURP00010024277 ENSVURP00010024277 ENSVURP00010024848 ENSVURP00010024848 TRNAU1AP TRNAU1AP RBM25 RBM25 SNRNP40 SNRNP40 PPIH PPIH LOC114028230 LOC114028230 ENSVURP00010025925 ENSVURP00010025925 TXNL4B TXNL4B DHX38 DHX38 DQX1 DQX1 LSM8 LSM8 TXNL4A TXNL4A SNRPD3 SNRPD3 PPWD1 PPWD1 CWC27 CWC27 ENSVURP00010028023 ENSVURP00010028023 ENSVURP00010028082 ENSVURP00010028082 ENSVURP00010028450 ENSVURP00010028450 PPIL2 PPIL2 LOC114046053 LOC114046053 ENSVURP00010029464 ENSVURP00010029464 DHX34 DHX34 SRRM1 SRRM1 NKAPL NKAPL ENSVURP00010030385 ENSVURP00010030385 RBM42 RBM42 LOC114032671 LOC114032671 SNRPA SNRPA C19orf54 C19orf54 SNRPF SNRPF DHX32 DHX32 ENSVURP00010032013 ENSVURP00010032013 LSM3-2 LSM3-2 TMIGD2 TMIGD2 YJU2 YJU2 CACTIN CACTIN ENSVURP00010032661 ENSVURP00010032661
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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ENSVURP00010000376Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (83 aa)
SRRM2Uncharacterized protein. (2852 aa)
LOC114043154PWI domain-containing protein. (683 aa)
ENSVURP00010000843Uncharacterized protein. (58 aa)
XAB2Uncharacterized protein. (864 aa)
LOC114043166Uncharacterized protein. (424 aa)
ENSVURP00010001224C3H1-type domain-containing protein. (184 aa)
SF3B3CPSF_A domain-containing protein. (1217 aa)
SF3B2SAP domain-containing protein. (896 aa)
ENSVURP00010001407MI domain-containing protein. (709 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (805 aa)
ENSVURP00010001689Helicase ATP-binding domain-containing protein. (461 aa)
DHX16Uncharacterized protein. (1043 aa)
ENSVURP00010001966Sm domain-containing protein. (57 aa)
PHF5AUncharacterized protein. (110 aa)
PPRC1RRM domain-containing protein. (1547 aa)
ENSVURP00010002355RRM domain-containing protein. (507 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (483 aa)
ENSVURP00010002552Uncharacterized protein. (238 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
WDR70WD_REPEATS_REGION domain-containing protein. (651 aa)
LOC114034912Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
ENSVURP00010003042annotation not available (86 aa)
SF3A3Matrin-type domain-containing protein. (501 aa)
ENSVURP00010003339Uncharacterized protein. (303 aa)
SNIP1Smad nuclear interacting protein 1. (368 aa)
ENSVURP00010003732RRM domain-containing protein. (123 aa)
LSM10Sm domain-containing protein. (123 aa)
PRKRIP1Uncharacterized protein. (178 aa)
WDR25WD_REPEATS_REGION domain-containing protein. (549 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
SF1CCHC-type domain-containing protein. (671 aa)
ENSVURP00010004375Trnau1ap domain-containing protein. (122 aa)
PRPF19Uncharacterized protein. (504 aa)
SLU7Slu7 domain-containing protein. (586 aa)
LOC114031006Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (122 aa)
ENSVURP00010005887Sm domain-containing protein. (87 aa)
CDC5LUncharacterized protein. (803 aa)
ENSVURP00010006207Sm domain-containing protein. (92 aa)
LOC114043304Uncharacterized protein. (686 aa)
SYF2SYF2 pre-mRNA splicing factor. (295 aa)
ENSVURP00010006603Uncharacterized protein. (511 aa)
ENSVURP00010006612Uncharacterized protein. (151 aa)
MFAP1MFAP1 domain-containing protein. (439 aa)
CRNKL1Uncharacterized protein. (687 aa)
ENSVURP00010007910Uncharacterized protein. (191 aa)
DDX23Uncharacterized protein. (818 aa)
ENSVURP00010008356Uncharacterized protein. (405 aa)
CWC25Cir_N domain-containing protein. (419 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (893 aa)
SART3Uncharacterized protein. (890 aa)
SNRPB2Uncharacterized protein. (225 aa)
ENSVURP00010009339Sm domain-containing protein. (78 aa)
DAW1WD_REPEATS_REGION domain-containing protein. (427 aa)
DDX46DEAD-box helicase 46. (1031 aa)
SF3B6RRM domain-containing protein. (170 aa)
WDR53WD_REPEATS_REGION domain-containing protein. (370 aa)
RBM22Uncharacterized protein. (420 aa)
PRPF8MPN domain-containing protein. (2335 aa)
TCERG1Uncharacterized protein. (1098 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (973 aa)
ENSVURP00010011350Ig-like domain-containing protein. (328 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1472 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
LOC114050192Sde2_N_Ubi domain-containing protein. (432 aa)
USP39Uncharacterized protein. (572 aa)
SNRPA1LRRcap domain-containing protein. (255 aa)
ENSVURP00010012456Uncharacterized protein. (380 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (834 aa)
BCAS2Uncharacterized protein. (225 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (136 aa)
LOC114031880Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
PQBP1WW domain-containing protein. (205 aa)
ZMAT5Zinc finger matrin-type 5. (159 aa)
CWC15Uncharacterized protein. (231 aa)
FAM32AUncharacterized protein. (111 aa)
SF3A1Uncharacterized protein. (786 aa)
CDC40WD_REPEATS_REGION domain-containing protein. (579 aa)
CCDC12Uncharacterized protein. (161 aa)
LOC114029994Uncharacterized protein. (668 aa)
PRPF31Nop domain-containing protein. (499 aa)
LOC114040343Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
ENSVURP00010015345annotation not available (166 aa)
SNRNP27SNRNP27 domain-containing protein. (155 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SMU1Uncharacterized protein. (513 aa)
PLRG1WD_REPEATS_REGION domain-containing protein. (516 aa)
DHX40Uncharacterized protein. (803 aa)
SNRNP70RRM domain-containing protein. (427 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
CTNNBL1Catenin beta like 1. (539 aa)
LOC114046273Uncharacterized protein. (83 aa)
LOC114045545Sm domain-containing protein. (86 aa)
DHX35Uncharacterized protein. (738 aa)
PRPF6Uncharacterized protein. (941 aa)
PRPF18SFM domain-containing protein. (342 aa)
CWF19L2Uncharacterized protein. (912 aa)
LRMDAUncharacterized protein. (226 aa)
RBM41RNA binding motif protein 41. (407 aa)
ENSVURP00010018544Uncharacterized protein. (385 aa)
RNF113AUncharacterized protein. (350 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
ENSVURP00010019848SKIP_SNW domain-containing protein. (501 aa)
ENSVURP00010019986Sm domain-containing protein. (100 aa)
SNRNP200Uncharacterized protein. (2136 aa)
ENSVURP00010020338annotation not available (683 aa)
ENSVURP00010020394Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SF3A2Matrin-type domain-containing protein. (547 aa)
ENSVURP00010020594annotation not available (424 aa)
ENSVURP00010020760Uncharacterized protein. (301 aa)
ENSVURP00010021166annotation not available (432 aa)
PRPF4WD_REPEATS_REGION domain-containing protein. (523 aa)
ENSVURP00010021538Uncharacterized protein. (59 aa)
ZMAT2U1-type domain-containing protein. (199 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (158 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
ISY1Uncharacterized protein. (282 aa)
SF3B1SF3b1 domain-containing protein. (1303 aa)
IKUncharacterized protein. (557 aa)
WBP11Uncharacterized protein. (643 aa)
ENSVURP00010023372Ubiquitin-like domain-containing protein. (73 aa)
ZC2HC1CUncharacterized protein. (536 aa)
BUD31Uncharacterized protein. (144 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (61 aa)
PRPF38APRP38_assoc domain-containing protein. (313 aa)
ENSVURP00010024277MI domain-containing protein. (907 aa)
ENSVURP00010024848Uncharacterized protein. (387 aa)
TRNAU1APUncharacterized protein. (287 aa)
RBM25Uncharacterized protein. (846 aa)
SNRNP40WD_REPEATS_REGION domain-containing protein. (361 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
LOC114028230WW domain-containing protein. (165 aa)
ENSVURP00010025925annotation not available (668 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
DHX38Uncharacterized protein. (1230 aa)
DQX1Uncharacterized protein. (722 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PPWD1Uncharacterized protein. (644 aa)
CWC27Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (284 aa)
ENSVURP00010028023annotation not available (122 aa)
ENSVURP00010028082Uncharacterized protein. (1204 aa)
ENSVURP00010028450Uncharacterized protein. (53 aa)
PPIL2Uncharacterized protein. (557 aa)
LOC114046053Uncharacterized protein. (194 aa)
ENSVURP00010029464SKIP_SNW domain-containing protein. (531 aa)
DHX34Uncharacterized protein. (1147 aa)
SRRM1PWI domain-containing protein. (907 aa)
NKAPLNFKB activating protein like. (426 aa)
ENSVURP00010030385annotation not available (119 aa)
RBM42RNA binding motif protein 42. (590 aa)
LOC114032671Uncharacterized protein. (169 aa)
SNRPAUncharacterized protein. (281 aa)
C19orf54Uncharacterized protein. (296 aa)
SNRPFSm domain-containing protein. (86 aa)
DHX32Uncharacterized protein. (747 aa)
ENSVURP00010032013Uncharacterized protein. (397 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
TMIGD2Ig-like domain-containing protein. (248 aa)
YJU2Uncharacterized protein. (326 aa)
CACTINUncharacterized protein. (779 aa)
ENSVURP00010032661Uncharacterized protein. (325 aa)
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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