12 items (Vombatus ursinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

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Your Input:
	U2AF2	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
	SF1	CCHC-type domain-containing protein. (671 aa)
	ENSVURP00010004375	Trnau1ap domain-containing protein. (122 aa)
	PRPF40B	Pre-mRNA processing factor 40 homolog B. (893 aa)
	LOC114029994	Uncharacterized protein. (668 aa)
	ENSVURP00010018544	Uncharacterized protein. (385 aa)
	ENSVURP00010020760	Uncharacterized protein. (301 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (158 aa)
	ENSVURP00010024848	Uncharacterized protein. (387 aa)
	TRNAU1AP	Uncharacterized protein. (287 aa)
	RBM25	Uncharacterized protein. (846 aa)
	ENSVURP00010025925	annotation not available (668 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVURP00010004375	ENSVURP00010018544	ENSVURP00010004375	ENSVURP00010018544	Trnau1ap domain-containing protein.	Uncharacterized protein.	0.882
ENSVURP00010004375	ENSVURP00010020760	ENSVURP00010004375	ENSVURP00010020760	Trnau1ap domain-containing protein.	Uncharacterized protein.	0.882
ENSVURP00010004375	ENSVURP00010024848	ENSVURP00010004375	ENSVURP00010024848	Trnau1ap domain-containing protein.	Uncharacterized protein.	0.882
ENSVURP00010004375	ENSVURP00010025925	ENSVURP00010004375	ENSVURP00010025925	Trnau1ap domain-containing protein.	annotation not available	0.938
ENSVURP00010004375	LOC114029994	ENSVURP00010004375	ENSVURP00010014640	Trnau1ap domain-containing protein.	Uncharacterized protein.	0.938
ENSVURP00010004375	PRPF40B	ENSVURP00010004375	ENSVURP00010008701	Trnau1ap domain-containing protein.	Pre-mRNA processing factor 40 homolog B.	0.918
ENSVURP00010004375	RBM25	ENSVURP00010004375	ENSVURP00010024864	Trnau1ap domain-containing protein.	Uncharacterized protein.	0.946
ENSVURP00010004375	SF1	ENSVURP00010004375	ENSVURP00010004371	Trnau1ap domain-containing protein.	CCHC-type domain-containing protein.	0.935
ENSVURP00010004375	SNRPC	ENSVURP00010004375	ENSVURP00010021672	Trnau1ap domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.967
ENSVURP00010004375	U2AF2	ENSVURP00010004375	ENSVURP00010003943	Trnau1ap domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.945
ENSVURP00010018544	ENSVURP00010004375	ENSVURP00010018544	ENSVURP00010004375	Uncharacterized protein.	Trnau1ap domain-containing protein.	0.882
ENSVURP00010018544	ENSVURP00010025925	ENSVURP00010018544	ENSVURP00010025925	Uncharacterized protein.	annotation not available	0.888
ENSVURP00010018544	LOC114029994	ENSVURP00010018544	ENSVURP00010014640	Uncharacterized protein.	Uncharacterized protein.	0.888
ENSVURP00010018544	PRPF40B	ENSVURP00010018544	ENSVURP00010008701	Uncharacterized protein.	Pre-mRNA processing factor 40 homolog B.	0.923
ENSVURP00010018544	RBM25	ENSVURP00010018544	ENSVURP00010024864	Uncharacterized protein.	Uncharacterized protein.	0.984
ENSVURP00010018544	SF1	ENSVURP00010018544	ENSVURP00010004371	Uncharacterized protein.	CCHC-type domain-containing protein.	0.815
ENSVURP00010018544	SNRPC	ENSVURP00010018544	ENSVURP00010021672	Uncharacterized protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.962
ENSVURP00010018544	TRNAU1AP	ENSVURP00010018544	ENSVURP00010024860	Uncharacterized protein.	Uncharacterized protein.	0.882
ENSVURP00010018544	U2AF2	ENSVURP00010018544	ENSVURP00010003943	Uncharacterized protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.891
ENSVURP00010020760	ENSVURP00010004375	ENSVURP00010020760	ENSVURP00010004375	Uncharacterized protein.	Trnau1ap domain-containing protein.	0.882