26 items (Vombatus ursinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AREG	EGF-like domain-containing protein. (239 aa)
	ENSVURP00010001704	Uncharacterized protein. (60 aa)
	ENSVURP00010001332	Uncharacterized protein. (602 aa)
	GREM1	Gremlin. (184 aa)
	ENSVURP00010012287	Uncharacterized protein. (60 aa)
	EPGN	EGF-like domain-containing protein. (147 aa)
	EREG	Epiregulin. (165 aa)
	ENSVURP00010013239	Uncharacterized protein. (81 aa)
	GHRL	Ghrelin and obestatin prepropeptide. (113 aa)
	AFAP1L2	Uncharacterized protein. (960 aa)
	ABI1	Uncharacterized protein. (481 aa)
	ERBB3	Protein kinase domain-containing protein. (1338 aa)
	DGKQ	Diacylglycerol kinase. (895 aa)
	ENSVURP00010026526	Tyrosine-protein kinase receptor. (552 aa)
	ERCC6	Uncharacterized protein. (1489 aa)
	ENSVURP00010019093	annotation not available (498 aa)
	EGFR	Receptor protein-tyrosine kinase. (1214 aa)
	PAK2	Non-specific serine/threonine protein kinase. (524 aa)
	LTK	Tyrosine-protein kinase receptor. (887 aa)
	ENSVURP00010008204	annotation not available (602 aa)
	ENSVURP00010007261	annotation not available (60 aa)
	ERBB4	Receptor protein-tyrosine kinase. (1308 aa)
	ENSVURP00010003469	Fibrinogen C-terminal domain-containing protein. (498 aa)
	STAP1	Uncharacterized protein. (302 aa)
	NRG1	Uncharacterized protein. (640 aa)
	TGFA	EGF-like domain-containing protein. (159 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABI1	EGFR	ENSVURP00010031959	ENSVURP00010017895	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.443
ABI1	PAK2	ENSVURP00010031959	ENSVURP00010010266	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.711
AREG	EGFR	ENSVURP00010012606	ENSVURP00010017895	EGF-like domain-containing protein.	Receptor protein-tyrosine kinase.	0.992
AREG	ENSVURP00010026526	ENSVURP00010012606	ENSVURP00010026526	EGF-like domain-containing protein.	Tyrosine-protein kinase receptor.	0.746
AREG	EPGN	ENSVURP00010012606	ENSVURP00010012590	EGF-like domain-containing protein.	EGF-like domain-containing protein.	0.829
AREG	ERBB3	ENSVURP00010012606	ENSVURP00010031011	EGF-like domain-containing protein.	Protein kinase domain-containing protein.	0.932
AREG	ERBB4	ENSVURP00010012606	ENSVURP00010004650	EGF-like domain-containing protein.	Receptor protein-tyrosine kinase.	0.932
AREG	EREG	ENSVURP00010012606	ENSVURP00010012600	EGF-like domain-containing protein.	Epiregulin.	0.922
AREG	LTK	ENSVURP00010012606	ENSVURP00010010013	EGF-like domain-containing protein.	Tyrosine-protein kinase receptor.	0.746
AREG	NRG1	ENSVURP00010012606	ENSVURP00010015766	EGF-like domain-containing protein.	Uncharacterized protein.	0.498
AREG	TGFA	ENSVURP00010012606	ENSVURP00010015567	EGF-like domain-containing protein.	EGF-like domain-containing protein.	0.839
EGFR	ABI1	ENSVURP00010017895	ENSVURP00010031959	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.443
EGFR	AREG	ENSVURP00010017895	ENSVURP00010012606	Receptor protein-tyrosine kinase.	EGF-like domain-containing protein.	0.992
EGFR	ENSVURP00010001332	ENSVURP00010017895	ENSVURP00010001332	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.445
EGFR	ENSVURP00010003469	ENSVURP00010017895	ENSVURP00010003469	Receptor protein-tyrosine kinase.	Fibrinogen C-terminal domain-containing protein.	0.802
EGFR	ENSVURP00010008204	ENSVURP00010017895	ENSVURP00010008204	Receptor protein-tyrosine kinase.	annotation not available	0.445
EGFR	ENSVURP00010013239	ENSVURP00010017895	ENSVURP00010013239	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.463
EGFR	ENSVURP00010019093	ENSVURP00010017895	ENSVURP00010019093	Receptor protein-tyrosine kinase.	annotation not available	0.802
EGFR	ENSVURP00010026526	ENSVURP00010017895	ENSVURP00010026526	Receptor protein-tyrosine kinase.	Tyrosine-protein kinase receptor.	0.800
EGFR	EPGN	ENSVURP00010017895	ENSVURP00010012590	Receptor protein-tyrosine kinase.	EGF-like domain-containing protein.	0.994