STRINGSTRING
PATL1 PATL1 DDX6 DDX6 DYNC1H1 DYNC1H1 PATL2 PATL2 CNOT7 CNOT7 RC3H1 RC3H1 LOC114046934 LOC114046934 EIF4ENIF1 EIF4ENIF1 ENSVURP00010016858 ENSVURP00010016858 LSM4 LSM4 LSM3 LSM3 ENSVURP00010023571 ENSVURP00010023571 C19orf54 C19orf54 ATXN2 ATXN2 LSM3-2 LSM3-2 NOCT NOCT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PATL1PAT1 domain-containing protein. (767 aa)
DDX6Uncharacterized protein; Belongs to the DEAD box helicase family. (483 aa)
DYNC1H1Uncharacterized protein. (4648 aa)
PATL2PAT1 homolog 2. (523 aa)
CNOT7Uncharacterized protein. (285 aa)
RC3H1Uncharacterized protein. (1134 aa)
LOC114046934Uncharacterized protein. (463 aa)
EIF4ENIF1Uncharacterized protein. (994 aa)
ENSVURP00010016858Uncharacterized protein. (73 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (125 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ENSVURP00010023571annotation not available (463 aa)
C19orf54Uncharacterized protein. (296 aa)
ATXN2LsmAD domain-containing protein. (1108 aa)
LSM3-2U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
NOCTEndo/exonuclease/phosphatase domain-containing protein. (452 aa)
Your Current Organism:
Vombatus ursinus
NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat
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