(46 nodes) Defense response to Gram-negative bacterium network (Vombatus ursinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC114047389	TIR domain-containing protein; Belongs to the Toll-like receptor family. (832 aa)
	SLC11A1	Uncharacterized protein. (572 aa)
	ENSVURP00010002731	Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family. (90 aa)
	LOC114047064	Uncharacterized protein. (469 aa)
	ENSVURP00010002618	annotation not available (190 aa)
	MPEG1	Macrophage expressed 1. (763 aa)
	LOC114031174	SERPIN domain-containing protein; Belongs to the serpin family. (400 aa)
	LOC114043367	Ig-like domain-containing protein. (190 aa)
	ENSVURP00010026626	Ribosomal_L7Ae domain-containing protein. (94 aa)
	RNASE6	Ribonuclease A family member k6; Belongs to the pancreatic ribonuclease family. (150 aa)
	ROMO1	Uncharacterized protein. (79 aa)
	ENSVURP00010023206	Uncharacterized protein. (164 aa)
	AQP1	Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family. (271 aa)
	ENSVURP00010021897	Ribosomal_L7Ae domain-containing protein. (115 aa)
	LOC114047389-2	TIR domain-containing protein; Belongs to the Toll-like receptor family. (881 aa)
	ENSVURP00010019974	Ribosomal_L7Ae domain-containing protein. (91 aa)
	ENSVURP00010019972	Ribosomal_L7Ae domain-containing protein. (51 aa)
	ENSVURP00010019738	Uncharacterized protein. (153 aa)
	ENSVURP00010019729	Uncharacterized protein. (150 aa)
	ENSVURP00010018718	annotation not available (400 aa)
	ENSVURP00010018472	annotation not available (90 aa)
	LOC114047064-2	Uncharacterized protein. (493 aa)
	ENSVURP00010017995	Ribosomal_L7Ae domain-containing protein. (115 aa)
	ENSVURP00010017682	Ribosomal_L7Ae domain-containing protein. (51 aa)
	LOC114046725	Uncharacterized protein. (482 aa)
	IL17F	Uncharacterized protein. (163 aa)
	ENSVURP00010016835	Ribosomal_L7Ae domain-containing protein. (115 aa)
	LOC114027986	Uncharacterized protein. (171 aa)
	LOC114040819	Uncharacterized protein. (200 aa)
	LOC114040884	Uncharacterized protein. (196 aa)
	ENSVURP00010013592	Ribosomal_L7Ae domain-containing protein. (115 aa)
	MR1	Ig-like domain-containing protein; Belongs to the MHC class I family. (338 aa)
	RARRES2	Uncharacterized protein. (172 aa)
	RPL30	Ribosomal_L7Ae domain-containing protein. (240 aa)
	ENSVURP00010006368	BPI2 domain-containing protein. (367 aa)
	ENSVURP00010006358	Uncharacterized protein. (81 aa)
	ENSVURP00010032841	Ribosomal_L7Ae domain-containing protein. (73 aa)
	ENSVURP00010032305	Ribosomal_L7Ae domain-containing protein. (51 aa)
	ENSVURP00010031260	Ribosomal_L7Ae domain-containing protein. (115 aa)
	IL23A	Interleukin 23 subunit alpha. (188 aa)
	ENSVURP00010030818	Ribosomal_L7Ae domain-containing protein. (115 aa)
	ENSVURP00010030285	Ribosomal_L7Ae domain-containing protein. (51 aa)
	IL22RA1	Ig-like domain-containing protein. (561 aa)
	ENSVURP00010030122	Uncharacterized protein. (132 aa)
	IL17D	Uncharacterized protein. (210 aa)
	DROSHA	Uncharacterized protein. (1348 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVURP00010006358	LOC114047389	ENSVURP00010006358	ENSVURP00010005912	Uncharacterized protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.482
ENSVURP00010006358	LOC114047389-2	ENSVURP00010006358	ENSVURP00010020176	Uncharacterized protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.482
ENSVURP00010006368	LOC114047389	ENSVURP00010006368	ENSVURP00010005912	BPI2 domain-containing protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.482
ENSVURP00010006368	LOC114047389-2	ENSVURP00010006368	ENSVURP00010020176	BPI2 domain-containing protein.	TIR domain-containing protein; Belongs to the Toll-like receptor family.	0.482
ENSVURP00010017682	ENSVURP00010019974	ENSVURP00010017682	ENSVURP00010019974	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.423
ENSVURP00010019729	IL17F	ENSVURP00010019729	ENSVURP00010017278	Uncharacterized protein.	Uncharacterized protein.	0.989
ENSVURP00010019729	IL22RA1	ENSVURP00010019729	ENSVURP00010030229	Uncharacterized protein.	Ig-like domain-containing protein.	0.578
ENSVURP00010019729	IL23A	ENSVURP00010019729	ENSVURP00010030944	Uncharacterized protein.	Interleukin 23 subunit alpha.	0.476
ENSVURP00010019738	IL17F	ENSVURP00010019738	ENSVURP00010017278	Uncharacterized protein.	Uncharacterized protein.	0.989
ENSVURP00010019738	IL22RA1	ENSVURP00010019738	ENSVURP00010030229	Uncharacterized protein.	Ig-like domain-containing protein.	0.578
ENSVURP00010019738	IL23A	ENSVURP00010019738	ENSVURP00010030944	Uncharacterized protein.	Interleukin 23 subunit alpha.	0.476
ENSVURP00010019972	ENSVURP00010019974	ENSVURP00010019972	ENSVURP00010019974	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.406
ENSVURP00010019974	ENSVURP00010017682	ENSVURP00010019974	ENSVURP00010017682	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.423
ENSVURP00010019974	ENSVURP00010019972	ENSVURP00010019974	ENSVURP00010019972	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.406
ENSVURP00010019974	ENSVURP00010030285	ENSVURP00010019974	ENSVURP00010030285	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.418
ENSVURP00010019974	ENSVURP00010032305	ENSVURP00010019974	ENSVURP00010032305	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.421
ENSVURP00010030285	ENSVURP00010019974	ENSVURP00010030285	ENSVURP00010019974	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.418
ENSVURP00010032305	ENSVURP00010019974	ENSVURP00010032305	ENSVURP00010019974	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.421
IL17D	IL22RA1	ENSVURP00010027960	ENSVURP00010030229	Uncharacterized protein.	Ig-like domain-containing protein.	0.752
IL17F	ENSVURP00010019729	ENSVURP00010017278	ENSVURP00010019729	Uncharacterized protein.	Uncharacterized protein.	0.989