(34 nodes) Presynaptic active zone network (Vombatus ursinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OTOF	Otoferlin. (1261 aa)
	ENSVURP00010032530	Uncharacterized protein. (1643 aa)
	ZZEF1	Uncharacterized protein. (2816 aa)
	CTBP2	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (445 aa)
	LRFN3	Uncharacterized protein. (664 aa)
	CTBP1	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (441 aa)
	NPTN	Uncharacterized protein. (367 aa)
	ENSVURP00010025333	annotation not available (375 aa)
	ENSVURP00010024697	C2 domain-containing protein. (176 aa)
	BSN	Bassoon presynaptic cytomatrix protein. (3850 aa)
	STX1B	Syntaxin 1B; Belongs to the syntaxin family. (279 aa)
	ENSVURP00010022607	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (375 aa)
	UNC13B	Unc-13 homolog B. (1563 aa)
	SYT11	Uncharacterized protein. (430 aa)
	ENSVURP00010018147	annotation not available (1253 aa)
	ENSVURP00010017825	Zf-piccolo domain-containing protein. (454 aa)
	ENSVURP00010017814	Uncharacterized protein. (1223 aa)
	ENSVURP00010017805	C2 domain-containing protein. (357 aa)
	ENSVURP00010017592	Uncharacterized protein. (1764 aa)
	PPFIA3	Uncharacterized protein. (1206 aa)
	ERC2	ELKS/RAB6-interacting/CAST family member 2. (978 aa)
	ADCY8	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1253 aa)
	CPLX3	Uncharacterized protein. (158 aa)
	RIMS1	C2 domain-containing protein. (219 aa)
	ENSVURP00010015348	Uncharacterized protein. (1038 aa)
	ENSVURP00010014956	Uncharacterized protein. (1764 aa)
	RIMS2	Uncharacterized protein. (1568 aa)
	CTNND1	Uncharacterized protein. (966 aa)
	ERC1	FIP-RBD domain-containing protein. (1116 aa)
	ENSVURP00010006737	C2 domain-containing protein. (135 aa)
	STX1A	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (278 aa)
	STX2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (288 aa)
	NECTIN1	Uncharacterized protein. (515 aa)
	RIMS3	C2 domain-containing protein. (310 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX3	STX1A	ENSVURP00010015610	ENSVURP00010004867	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.439
CPLX3	STX1B	ENSVURP00010015610	ENSVURP00010023101	Uncharacterized protein.	Syntaxin 1B; Belongs to the syntaxin family.	0.439
CTBP1	CTBP2	ENSVURP00010027704	ENSVURP00010031925	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.886
CTBP1	ENSVURP00010017805	ENSVURP00010027704	ENSVURP00010017805	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C2 domain-containing protein.	0.636
CTBP1	ENSVURP00010017814	ENSVURP00010027704	ENSVURP00010017814	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein.	0.579
CTBP2	CTBP1	ENSVURP00010031925	ENSVURP00010027704	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.886
CTBP2	ENSVURP00010017805	ENSVURP00010031925	ENSVURP00010017805	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C2 domain-containing protein.	0.636
CTBP2	ENSVURP00010017814	ENSVURP00010031925	ENSVURP00010017814	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein.	0.579
CTNND1	NECTIN1	ENSVURP00010008005	ENSVURP00010004271	Uncharacterized protein.	Uncharacterized protein.	0.582
ENSVURP00010006737	ENSVURP00010015348	ENSVURP00010006737	ENSVURP00010015348	C2 domain-containing protein.	Uncharacterized protein.	0.937
ENSVURP00010006737	ENSVURP00010032530	ENSVURP00010006737	ENSVURP00010032530	C2 domain-containing protein.	Uncharacterized protein.	0.872
ENSVURP00010006737	ERC1	ENSVURP00010006737	ENSVURP00010007738	C2 domain-containing protein.	FIP-RBD domain-containing protein.	0.475
ENSVURP00010006737	ERC2	ENSVURP00010006737	ENSVURP00010016247	C2 domain-containing protein.	ELKS/RAB6-interacting/CAST family member 2.	0.475
ENSVURP00010006737	PPFIA3	ENSVURP00010006737	ENSVURP00010016973	C2 domain-containing protein.	Uncharacterized protein.	0.733
ENSVURP00010006737	RIMS1	ENSVURP00010006737	ENSVURP00010015359	C2 domain-containing protein.	C2 domain-containing protein.	0.937
ENSVURP00010006737	RIMS2	ENSVURP00010006737	ENSVURP00010010209	C2 domain-containing protein.	Uncharacterized protein.	0.999
ENSVURP00010006737	RIMS3	ENSVURP00010006737	ENSVURP00010002243	C2 domain-containing protein.	C2 domain-containing protein.	0.937
ENSVURP00010006737	STX1A	ENSVURP00010006737	ENSVURP00010004867	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.755
ENSVURP00010006737	STX1B	ENSVURP00010006737	ENSVURP00010023101	C2 domain-containing protein.	Syntaxin 1B; Belongs to the syntaxin family.	0.755
ENSVURP00010006737	STX2	ENSVURP00010006737	ENSVURP00010004865	C2 domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.755