(27 nodes) SAGA-type complex network (Vombatus ursinus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSVURP00010006076	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (213 aa)
	TADA2B	Transcriptional adapter. (420 aa)
	ENSVURP00010028198	Uncharacterized protein. (273 aa)
	SUPT7L	BTP domain-containing protein. (412 aa)
	MBIP	Uncharacterized protein. (342 aa)
	LOC114052489-2	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3836 aa)
	TAF4	TAFH domain-containing protein. (1118 aa)
	USP22	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (523 aa)
	LOC114052489	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3847 aa)
	SUPT20H	Uncharacterized protein. (858 aa)
	EFR3A	Uncharacterized protein. (828 aa)
	TADA2A	Transcriptional adapter. (443 aa)
	ZZZ3	Uncharacterized protein. (930 aa)
	TADA3	Uncharacterized protein. (432 aa)
	SGF29	SGF29 C-terminal domain-containing protein. (296 aa)
	MAP3K7	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. (607 aa)
	KAT14	N-acetyltransferase domain-containing protein. (782 aa)
	ENSVURP00010007824	SCA7 domain-containing protein. (833 aa)
	TAF9B	Uncharacterized protein. (256 aa)
	SUPT3H	SPT3 homolog, SAGA and STAGA complex component. (346 aa)
	ENSVURP00010005539	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (211 aa)
	TADA1	Uncharacterized protein. (335 aa)
	YEATS2	Uncharacterized protein. (1395 aa)
	TAF6L	TATA-box binding protein associated factor 6 like. (612 aa)
	ENSVURP00010001230	annotation not available (589 aa)
	LOC114049488	Uncharacterized protein. (589 aa)
	TAF6	TAF domain-containing protein. (679 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVURP00010001230	ENSVURP00010005539	ENSVURP00010001230	ENSVURP00010005539	annotation not available	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.978
ENSVURP00010001230	ENSVURP00010006076	ENSVURP00010001230	ENSVURP00010006076	annotation not available	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.978
ENSVURP00010001230	ENSVURP00010007824	ENSVURP00010001230	ENSVURP00010007824	annotation not available	SCA7 domain-containing protein.	0.969
ENSVURP00010001230	ENSVURP00010028198	ENSVURP00010001230	ENSVURP00010028198	annotation not available	Uncharacterized protein.	0.975
ENSVURP00010001230	KAT14	ENSVURP00010001230	ENSVURP00010008217	annotation not available	N-acetyltransferase domain-containing protein.	0.587
ENSVURP00010001230	LOC114052489	ENSVURP00010001230	ENSVURP00010022807	annotation not available	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.971
ENSVURP00010001230	LOC114052489-2	ENSVURP00010001230	ENSVURP00010025532	annotation not available	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.971
ENSVURP00010001230	MAP3K7	ENSVURP00010001230	ENSVURP00010008778	annotation not available	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.	0.433
ENSVURP00010001230	MBIP	ENSVURP00010001230	ENSVURP00010026543	annotation not available	Uncharacterized protein.	0.510
ENSVURP00010001230	SGF29	ENSVURP00010001230	ENSVURP00010010991	annotation not available	SGF29 C-terminal domain-containing protein.	0.985
ENSVURP00010001230	SUPT20H	ENSVURP00010001230	ENSVURP00010022067	annotation not available	Uncharacterized protein.	0.986
ENSVURP00010001230	SUPT3H	ENSVURP00010001230	ENSVURP00010005899	annotation not available	SPT3 homolog, SAGA and STAGA complex component.	0.988
ENSVURP00010001230	SUPT7L	ENSVURP00010001230	ENSVURP00010026738	annotation not available	BTP domain-containing protein.	0.984
ENSVURP00010001230	TADA1	ENSVURP00010001230	ENSVURP00010004351	annotation not available	Uncharacterized protein.	0.951
ENSVURP00010001230	TADA2A	ENSVURP00010001230	ENSVURP00010015422	annotation not available	Transcriptional adapter.	0.966
ENSVURP00010001230	TADA2B	ENSVURP00010001230	ENSVURP00010028906	annotation not available	Transcriptional adapter.	0.980
ENSVURP00010001230	TADA3	ENSVURP00010001230	ENSVURP00010014302	annotation not available	Uncharacterized protein.	0.988
ENSVURP00010001230	TAF4	ENSVURP00010001230	ENSVURP00010023774	annotation not available	TAFH domain-containing protein.	0.985
ENSVURP00010001230	TAF6	ENSVURP00010001230	ENSVURP00010000245	annotation not available	TAF domain-containing protein.	0.992
ENSVURP00010001230	TAF6L	ENSVURP00010001230	ENSVURP00010001818	annotation not available	TATA-box binding protein associated factor 6 like.	0.991