6 items (Vombatus ursinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GDPD1	GP-PDE domain-containing protein. (313 aa)
	GDPD5	GP-PDE domain-containing protein. (595 aa)
	LOC114052275	GP-PDE domain-containing protein. (331 aa)
	GDPD2	GP-PDE domain-containing protein. (539 aa)
	GPCPD1	Glycerophosphocholine phosphodiesterase 1. (652 aa)
	GDPD3	GP-PDE domain-containing protein. (406 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GDPD1	GDPD3	ENSVURP00010016398	ENSVURP00010011233	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.889
GDPD1	GPCPD1	ENSVURP00010016398	ENSVURP00010010217	GP-PDE domain-containing protein.	Glycerophosphocholine phosphodiesterase 1.	0.765
GDPD2	GPCPD1	ENSVURP00010016655	ENSVURP00010010217	GP-PDE domain-containing protein.	Glycerophosphocholine phosphodiesterase 1.	0.765
GDPD3	GDPD1	ENSVURP00010011233	ENSVURP00010016398	GP-PDE domain-containing protein.	GP-PDE domain-containing protein.	0.889
GDPD3	GPCPD1	ENSVURP00010011233	ENSVURP00010010217	GP-PDE domain-containing protein.	Glycerophosphocholine phosphodiesterase 1.	0.765
GDPD5	GPCPD1	ENSVURP00010022199	ENSVURP00010010217	GP-PDE domain-containing protein.	Glycerophosphocholine phosphodiesterase 1.	0.777
GPCPD1	GDPD1	ENSVURP00010010217	ENSVURP00010016398	Glycerophosphocholine phosphodiesterase 1.	GP-PDE domain-containing protein.	0.765
GPCPD1	GDPD2	ENSVURP00010010217	ENSVURP00010016655	Glycerophosphocholine phosphodiesterase 1.	GP-PDE domain-containing protein.	0.765
GPCPD1	GDPD3	ENSVURP00010010217	ENSVURP00010011233	Glycerophosphocholine phosphodiesterase 1.	GP-PDE domain-containing protein.	0.765
GPCPD1	GDPD5	ENSVURP00010010217	ENSVURP00010022199	Glycerophosphocholine phosphodiesterase 1.	GP-PDE domain-containing protein.	0.777
GPCPD1	LOC114052275	ENSVURP00010010217	ENSVURP00010007165	Glycerophosphocholine phosphodiesterase 1.	GP-PDE domain-containing protein.	0.778
LOC114052275	GPCPD1	ENSVURP00010007165	ENSVURP00010010217	GP-PDE domain-containing protein.	Glycerophosphocholine phosphodiesterase 1.	0.778