10 items (Vombatus ursinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RYR1	Ryanodine receptor 1. (4840 aa)
	ENSVURP00010008934	Uncharacterized protein. (4894 aa)
	ITPR1	Uncharacterized protein. (2710 aa)
	RYR3	Ryanodine receptor 3. (4864 aa)
	SDF2	Uncharacterized protein. (219 aa)
	POMT1	Uncharacterized protein. (725 aa)
	ITPR2	Inositol 1,4,5-trisphosphate receptor type 2. (2705 aa)
	ITPR3	Uncharacterized protein. (2668 aa)
	POMT2	Uncharacterized protein. (754 aa)
	SDF2L1	Stromal cell derived factor 2 like 1. (181 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVURP00010008934	RYR1	ENSVURP00010008934	ENSVURP00010030340	Uncharacterized protein.	Ryanodine receptor 1.	0.974
ENSVURP00010008934	RYR3	ENSVURP00010008934	ENSVURP00010012998	Uncharacterized protein.	Ryanodine receptor 3.	0.984
ITPR1	ITPR2	ENSVURP00010011788	ENSVURP00010020118	Uncharacterized protein.	Inositol 1,4,5-trisphosphate receptor type 2.	0.925
ITPR1	ITPR3	ENSVURP00010011788	ENSVURP00010021007	Uncharacterized protein.	Uncharacterized protein.	0.925
ITPR2	ITPR1	ENSVURP00010020118	ENSVURP00010011788	Inositol 1,4,5-trisphosphate receptor type 2.	Uncharacterized protein.	0.925
ITPR2	ITPR3	ENSVURP00010020118	ENSVURP00010021007	Inositol 1,4,5-trisphosphate receptor type 2.	Uncharacterized protein.	0.886
ITPR3	ITPR1	ENSVURP00010021007	ENSVURP00010011788	Uncharacterized protein.	Uncharacterized protein.	0.925
ITPR3	ITPR2	ENSVURP00010021007	ENSVURP00010020118	Uncharacterized protein.	Inositol 1,4,5-trisphosphate receptor type 2.	0.886
POMT1	POMT2	ENSVURP00010016408	ENSVURP00010021067	Uncharacterized protein.	Uncharacterized protein.	0.989
POMT2	POMT1	ENSVURP00010021067	ENSVURP00010016408	Uncharacterized protein.	Uncharacterized protein.	0.989
RYR1	ENSVURP00010008934	ENSVURP00010030340	ENSVURP00010008934	Ryanodine receptor 1.	Uncharacterized protein.	0.974
RYR1	RYR3	ENSVURP00010030340	ENSVURP00010012998	Ryanodine receptor 1.	Ryanodine receptor 3.	0.977
RYR3	ENSVURP00010008934	ENSVURP00010012998	ENSVURP00010008934	Ryanodine receptor 3.	Uncharacterized protein.	0.984
RYR3	RYR1	ENSVURP00010012998	ENSVURP00010030340	Ryanodine receptor 3.	Ryanodine receptor 1.	0.977
SDF2	SDF2L1	ENSVURP00010013507	ENSVURP00010028466	Uncharacterized protein.	Stromal cell derived factor 2 like 1.	0.486
SDF2L1	SDF2	ENSVURP00010028466	ENSVURP00010013507	Stromal cell derived factor 2 like 1.	Uncharacterized protein.	0.486