44 items (Vombatus ursinus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MOB2	Uncharacterized protein. (306 aa)
	DUSP8	Uncharacterized protein. (613 aa)
	ENSVURP00010026384	annotation not available (215 aa)
	DUSP9	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (380 aa)
	IL6ST	Uncharacterized protein. (921 aa)
	MAPK1	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (349 aa)
	ENSVURP00010029067	annotation not available (466 aa)
	ENSVURP00010029419	Tyrosine-protein kinase. (1180 aa)
	ENSVURP00010029447	Tyrosine-protein kinase. (1149 aa)
	ENSVURP00010007417	annotation not available (665 aa)
	LOC114038227	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (643 aa)
	JAK2	Tyrosine-protein kinase. (1132 aa)
	MAP2K2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (400 aa)
	SSH3	Uncharacterized protein. (651 aa)
	DUSP5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (380 aa)
	SSH1	Uncharacterized protein. (1055 aa)
	DUSP16	Uncharacterized protein. (657 aa)
	STYX	Uncharacterized protein. (223 aa)
	MAPK3	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (380 aa)
	SSH2	Uncharacterized protein. (1440 aa)
	LOC114050197	Uncharacterized protein. (482 aa)
	ENSVURP00010014220	Uncharacterized protein. (209 aa)
	DUSP4	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (393 aa)
	ENSVURP00010015416	DSPc domain-containing protein. (125 aa)
	ENSVURP00010015425	annotation not available (125 aa)
	ENSVURP00010015428	Uncharacterized protein. (105 aa)
	LOC114040362	Uncharacterized protein. (99 aa)
	ENSVURP00010018093	Tyrosine-protein phosphatase domain-containing protein. (168 aa)
	DUSP15	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (226 aa)
	DUSP2	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (316 aa)
	DUSP6	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (382 aa)
	LOC114049654	Uncharacterized protein. (466 aa)
	ENSVURP00010022058	annotation not available (482 aa)
	DUSP7	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (378 aa)
	MAP2K1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (393 aa)
	DUSP19	Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (221 aa)
	DUSP1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (339 aa)
	DUSP12	Dual specificity phosphatase 12. (313 aa)
	PEA15	DED domain-containing protein. (130 aa)
	LOC114050566	Uncharacterized protein. (215 aa)
	DUSP28	Uncharacterized protein. (171 aa)
	PTPN11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (597 aa)
	ENSVURP00010006081	Uncharacterized protein. (62 aa)
	LOC114034206	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (665 aa)

Your Current Organism:

Vombatus ursinus

NCBI taxonomy Id: 29139
Other names: V. ursinus, coarse-haired wombat, common wombat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DUSP1	DUSP6	ENSVURP00010001154	ENSVURP00010020309	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.532
DUSP1	DUSP7	ENSVURP00010001154	ENSVURP00010022343	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.532
DUSP1	DUSP9	ENSVURP00010001154	ENSVURP00010027364	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.535
DUSP1	MAPK1	ENSVURP00010001154	ENSVURP00010028502	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.958
DUSP1	MAPK3	ENSVURP00010001154	ENSVURP00010011204	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.958
DUSP12	MAPK1	ENSVURP00010002617	ENSVURP00010028502	Dual specificity phosphatase 12.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.700
DUSP12	MAPK3	ENSVURP00010002617	ENSVURP00010011204	Dual specificity phosphatase 12.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.700
DUSP15	MAPK1	ENSVURP00010018294	ENSVURP00010028502	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.637
DUSP15	MAPK3	ENSVURP00010018294	ENSVURP00010011204	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.637
DUSP16	DUSP6	ENSVURP00010009516	ENSVURP00010020309	Uncharacterized protein.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.677
DUSP16	DUSP7	ENSVURP00010009516	ENSVURP00010022343	Uncharacterized protein.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.677
DUSP16	DUSP9	ENSVURP00010009516	ENSVURP00010027364	Uncharacterized protein.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.669
DUSP16	ENSVURP00010022058	ENSVURP00010009516	ENSVURP00010022058	Uncharacterized protein.	annotation not available	0.795
DUSP16	LOC114050197	ENSVURP00010009516	ENSVURP00010012655	Uncharacterized protein.	Uncharacterized protein.	0.795
DUSP16	MAPK1	ENSVURP00010009516	ENSVURP00010028502	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.958
DUSP16	MAPK3	ENSVURP00010009516	ENSVURP00010011204	Uncharacterized protein.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.958
DUSP19	MAPK1	ENSVURP00010023648	ENSVURP00010028502	Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.637
DUSP19	MAPK3	ENSVURP00010023648	ENSVURP00010011204	Dual specificity phosphatase 19; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.637
DUSP2	DUSP6	ENSVURP00010020252	ENSVURP00010020309	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.532
DUSP2	DUSP7	ENSVURP00010020252	ENSVURP00010022343	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.532